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Asym. Unit
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Asym.Unit (28 KB)
Biol.Unit 1 (24 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF CISPLATIN BOUND TO A HUMAN COPPER CHAPERONE (DIMER)
Authors
:
A. K. Boal, A. C. Rosenzweig
Date
:
03 Sep 09 (Deposition) - 22 Sep 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.14
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Beta-Alpha-Beta-Beta-Alpha-Beta, Transport Protein, Cisplatin, Platinum, Chaperone, Copper Transport, Ion Transport, Metal-Binding, Transport, Metal Transport
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
A. K. Boal, A. C. Rosenzweig
Crystal Structures Of Cisplatin Bound To A Human Copper Chaperone.
J. Am. Chem. Soc. V. 131 14196 2009
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: CISPLATIN (CPTa)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CPT
1
Ligand/Ion
CISPLATIN
2
SO4
3
Ligand/Ion
SULFATE ION
[
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR A:11 , CYS A:12 , CYS A:15 , THR B:11 , CYS B:12 , CYS B:15
BINDING SITE FOR RESIDUE CPT A 69
2
AC2
SOFTWARE
HIS A:46 , SER A:47 , THR A:50
BINDING SITE FOR RESIDUE SO4 A 71
3
AC3
SOFTWARE
GLY B:28 , HOH B:96 , HOH B:114 , HOH B:126
BINDING SITE FOR RESIDUE SO4 B 70
4
AC4
SOFTWARE
HIS B:46 , SER B:47 , THR B:50 , HOH B:91 , HOH B:120
BINDING SITE FOR RESIDUE SO4 B 71
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: HMA_1 (A:7-35,B:7-35)
2: HMA_2 (A:10-68,B:10-68)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HMA_1
PS01047
Heavy-metal-associated domain.
ATOX1_HUMAN
7-35
2
A:7-35
B:7-35
2
HMA_2
PS50846
Heavy-metal-associated domain profile.
ATOX1_HUMAN
10-68
2
A:10-68
B:10-68
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Exons
(3, 6)
Info
All Exons
Exon 1.2c (A:2-2 | B:2-2)
Exon 1.5b (A:3-28 | B:3-28)
Exon 1.6b (A:28-68 | B:28-68)
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All Exon Boundaries
1: Boundary -/1.2c
2: Boundary 1.2c/1.5b
3: Boundary 1.5b/1.6b
4: Boundary 1.6b/1.6e
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2c
ENST00000313115
2c
ENSE00001532783
chr5:
151138210-151138107
104
ATOX1_HUMAN
1-2
2
2
A:2-2
B:2-2
1
1
1.5b
ENST00000313115
5b
ENSE00001212343
chr5:
151131340-151131265
76
ATOX1_HUMAN
3-28
26
2
A:3-28
B:3-28
26
26
1.6b
ENST00000313115
6b
ENSE00001212334
chr5:
151126010-151125840
171
ATOX1_HUMAN
28-68
41
2
A:28-68
B:28-68
41
41
1.6e
ENST00000313115
6e
ENSE00001532778
chr5:
151122520-151122384
137
ATOX1_HUMAN
-
0
0
-
-
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3iwxa_ (A:)
1b: SCOP_d3iwxb_ (B:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ferredoxin-like
(1795)
Superfamily
:
HMA, heavy metal-associated domain
(79)
Family
:
HMA, heavy metal-associated domain
(59)
Protein domain
:
ATX1 metallochaperone protein (ATOX1)
(16)
Human (Homo sapiens), HAH1 [TaxId: 9606]
(10)
1a
d3iwxa_
A:
1b
d3iwxb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_3iwxA00 (A:2-68)
1b: CATH_3iwxB00 (B:2-68)
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(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-Beta Plaits
(1688)
Homologous Superfamily
:
[code=3.30.70.100, no name defined]
(82)
Human (Homo sapiens)
(29)
1a
3iwxA00
A:2-68
1b
3iwxB00
B:2-68
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Pfam Domains
(0, 0)
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all PFAM domains
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Asymmetric Unit 1
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