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3IU3
Biol. Unit 2
Info
Asym.Unit (547 KB)
Biol.Unit 1 (181 KB)
Biol.Unit 2 (183 KB)
Biol.Unit 3 (185 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE FAB FRAGMENT OF THERAPEUTIC ANTIBODY BASILIXIMAB IN COMPLEX WITH IL-2RA (CD25) ECTODOMAIN
Authors
:
J. Du, H. Yang, J. Wang, J. Ding
Date
:
29 Aug 09 (Deposition) - 26 Jan 10 (Release) - 05 Feb 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B,C,D,H,I,J,K,L
Biol. Unit 1: A,B,K (1x)
Biol. Unit 2: C,D,J (1x)
Biol. Unit 3: H,I,L (1x)
Keywords
:
Il-2Ra, Cd25, Basiliximab, Simulect, Therapeutic Antibody, Disulfide Bond, Glycoprotein, Membrane, Receptor, Sushi, Transmembrane, Immune System
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
J. Du, H. Yang, D. Zhang, J. Wang, H. Guo, B. Peng, Y. Guo, J. Ding
Structural Basis For The Blockage Of Il-2 Signaling By Therapeutic Antibody Basiliximab
J. Immunol. V. 184 1361 2010
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
1b: BETA-D-MANNOSE (BMAb)
1c: BETA-D-MANNOSE (BMAc)
2a: N-ACETYL-D-GLUCOSAMINE (NAGa)
2b: N-ACETYL-D-GLUCOSAMINE (NAGb)
2c: N-ACETYL-D-GLUCOSAMINE (NAGc)
2d: N-ACETYL-D-GLUCOSAMINE (NAGd)
2e: N-ACETYL-D-GLUCOSAMINE (NAGe)
2f: N-ACETYL-D-GLUCOSAMINE (NAGf)
View:
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Label:
No.
Name
Count
Type
Full Name
1
BMA
1
Ligand/Ion
BETA-D-MANNOSE
2
NAG
2
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
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Sites
(3, 3)
Info
All Sites
1: AC4 (SOFTWARE)
2: AC5 (SOFTWARE)
3: AC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC4
SOFTWARE
ASN J:49 , SER J:51 , HIS J:52 , NAG J:301
BINDING SITE FOR RESIDUE NAG J 300
2
AC5
SOFTWARE
NAG J:300 , BMA J:302
BINDING SITE FOR RESIDUE NAG J 301
3
AC6
SOFTWARE
NAG J:301
BINDING SITE FOR RESIDUE BMA J 302
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SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_066403 (W145R, chain D, )
2: VAR_003897 (V188L, chain D, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_066403
W
40
R
IGKC_HUMAN
Disease (IGKCD)
---
D
W
145
R
2
UniProt
VAR_003897
V
83
L
IGKC_HUMAN
Unclassified
---
D
V
188
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 3)
Info
All PROSITE Patterns/Profiles
1: SUSHI (J:1-63,J:103-158)
2: IG_MHC (D:189-195)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SUSHI
PS50923
Sushi/CCP/SCR domain profile.
IL2RA_HUMAN
22-84
123-186
2
-
J:1-63
-
-
J:103-158
-
2
IG_MHC
PS00290
Immunoglobulins and major histocompatibility complex proteins signature.
IGKC_HUMAN
85-91
1
-
D:189-195
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(0, 0)
Info
All SCOP Domains
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Sorry, no Info available
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CATH Domains
(1, 9)
Info
all CATH domains
1a: CATH_3iu3B02 (B:106-208)
1b: CATH_3iu3A02 (A:116-215)
1c: CATH_3iu3C02 (C:116-215)
1d: CATH_3iu3H02 (H:116-215)
1e: CATH_3iu3D02 (D:106-208)
1f: CATH_3iu3L02 (L:106-208)
1g: CATH_3iu3A01 (A:1-115)
1h: CATH_3iu3C01 (C:1-115)
1i: CATH_3iu3H01 (H:1-115)
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Classes
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Topologies
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)
(
)
Organisms
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)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
[unclassified]
(54)
1a
3iu3B02
B:106-208
1b
3iu3A02
A:116-215
1c
3iu3C02
C:116-215
1d
3iu3H02
H:116-215
1e
3iu3D02
D:106-208
1f
3iu3L02
L:106-208
1g
3iu3A01
A:1-115
1h
3iu3C01
C:1-115
1i
3iu3H01
H:1-115
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Chain J
Asymmetric Unit 1
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Asym.Unit (547 KB)
Header - Asym.Unit
Biol.Unit 1 (181 KB)
Header - Biol.Unit 1
Biol.Unit 2 (183 KB)
Header - Biol.Unit 2
Biol.Unit 3 (185 KB)
Header - Biol.Unit 3
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