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3ISS
Asym. Unit
Info
Asym.Unit (1.6 MB)
Biol.Unit 1 (146 KB)
Biol.Unit 10 (148 KB)
Biol.Unit 11 (146 KB)
Biol.Unit 12 (149 KB)
Biol.Unit 2 (147 KB)
Biol.Unit 3 (146 KB)
Biol.Unit 4 (146 KB)
Biol.Unit 5 (146 KB)
Biol.Unit 6 (147 KB)
Biol.Unit 7 (147 KB)
Biol.Unit 8 (145 KB)
Biol.Unit 9 (148 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ENOLPYRUVYL-UDP-GLCNAC SYNTHASE (MURA):UDP-N-ACETYLMURAMIC ACID:PHOSPHITE FROM ESCHERICHIA COLI
Authors
:
S. G. Jackson, F. Zhang, P. Chindemi, M. S. Junop, P. J. Berti
Date
:
27 Aug 09 (Deposition) - 24 Nov 09 (Release) - 27 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E (1x)
Biol. Unit 6: F (1x)
Biol. Unit 7: G (1x)
Biol. Unit 8: H (1x)
Biol. Unit 9: I (1x)
Biol. Unit 10: J (1x)
Biol. Unit 11: K (1x)
Biol. Unit 12: L (1x)
Keywords
:
Protein-Ligand, Cell Cycle, Cell Division, Cell Shape, Cell Wall Biogenesis/Degradation, Peptidoglycan Synthesis, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. G. Jackson, F. Zhang, P. Chindemi, M. S. Junop, P. J. Berti
Evidence Of Kinetic Control Of Ligand Binding And Staged Product Release In Mura (Enolpyruvyl Udp-Glcnac Synthase)-Catalyzed Reactions .
Biochemistry V. 48 11715 2009
[
close entry info
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Hetero Components
(2, 24)
Info
All Hetero Components
1a: URIDINE-DIPHOSPHATE-2(N-ACETYLGLUC... (EPUa)
1b: URIDINE-DIPHOSPHATE-2(N-ACETYLGLUC... (EPUb)
1c: URIDINE-DIPHOSPHATE-2(N-ACETYLGLUC... (EPUc)
1d: URIDINE-DIPHOSPHATE-2(N-ACETYLGLUC... (EPUd)
1e: URIDINE-DIPHOSPHATE-2(N-ACETYLGLUC... (EPUe)
1f: URIDINE-DIPHOSPHATE-2(N-ACETYLGLUC... (EPUf)
1g: URIDINE-DIPHOSPHATE-2(N-ACETYLGLUC... (EPUg)
1h: URIDINE-DIPHOSPHATE-2(N-ACETYLGLUC... (EPUh)
1i: URIDINE-DIPHOSPHATE-2(N-ACETYLGLUC... (EPUi)
1j: URIDINE-DIPHOSPHATE-2(N-ACETYLGLUC... (EPUj)
1k: URIDINE-DIPHOSPHATE-2(N-ACETYLGLUC... (EPUk)
1l: URIDINE-DIPHOSPHATE-2(N-ACETYLGLUC... (EPUl)
2a: PHOSPHITE ION (PO3a)
2b: PHOSPHITE ION (PO3b)
2c: PHOSPHITE ION (PO3c)
2d: PHOSPHITE ION (PO3d)
2e: PHOSPHITE ION (PO3e)
2f: PHOSPHITE ION (PO3f)
2g: PHOSPHITE ION (PO3g)
2h: PHOSPHITE ION (PO3h)
2i: PHOSPHITE ION (PO3i)
2j: PHOSPHITE ION (PO3j)
2k: PHOSPHITE ION (PO3k)
2l: PHOSPHITE ION (PO3l)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EPU
12
Ligand/Ion
URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL) BUTYRICACID
2
PO3
12
Ligand/Ion
PHOSPHITE ION
[
close Hetero Component info
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Sites
(24, 24)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:91 , ARG A:397
BINDING SITE FOR RESIDUE PO3 A 501
02
AC2
SOFTWARE
LYS A:22 , ASN A:23 , ALA A:119 , ARG A:120 , PRO A:121 , VAL A:122 , ASP A:123 , LEU A:124 , LYS A:160 , VAL A:161 , SER A:162 , VAL A:163 , GLY A:164 , ASP A:305 , VAL A:327 , PHE A:328 , LEU A:370 , HOH A:425 , HOH A:445 , HOH A:780
BINDING SITE FOR RESIDUE EPU A 601
03
AC3
SOFTWARE
ARG B:91 , CYS B:115 , ARG B:397
BINDING SITE FOR RESIDUE PO3 B 502
04
AC4
SOFTWARE
LYS B:22 , ASN B:23 , ALA B:92 , TRP B:95 , ALA B:119 , ARG B:120 , PRO B:121 , VAL B:122 , ASP B:123 , LEU B:124 , HIS B:125 , LYS B:160 , SER B:162 , VAL B:163 , GLY B:164 , THR B:304 , ASP B:305 , VAL B:327 , PHE B:328 , LEU B:370 , ARG B:371 , HOH B:441 , HOH B:650
BINDING SITE FOR RESIDUE EPU B 602
05
AC5
SOFTWARE
ARG C:91 , CYS C:115 , ARG C:120 , ARG C:397
BINDING SITE FOR RESIDUE PO3 C 502
06
AC6
SOFTWARE
LYS C:22 , ASN C:23 , ALA C:119 , ARG C:120 , PRO C:121 , VAL C:122 , ASP C:123 , LEU C:124 , LYS C:160 , SER C:162 , VAL C:163 , GLY C:164 , ASP C:305 , VAL C:327 , PHE C:328 , LEU C:370 , HOH C:423 , HOH C:469 , HOH C:470 , HOH C:555 , HOH C:797
BINDING SITE FOR RESIDUE EPU C 603
07
AC7
SOFTWARE
ARG D:91 , CYS D:115 , ARG D:120 , HOH D:663
BINDING SITE FOR RESIDUE PO3 D 503
08
AC8
SOFTWARE
LYS D:22 , ASN D:23 , TRP D:95 , ALA D:119 , ARG D:120 , PRO D:121 , VAL D:122 , ASP D:123 , LEU D:124 , HIS D:125 , LYS D:160 , SER D:162 , VAL D:163 , GLY D:164 , ASP D:305 , VAL D:327 , PHE D:328 , LEU D:370 , HOH D:435 , HOH D:471
BINDING SITE FOR RESIDUE EPU D 604
09
AC9
SOFTWARE
CYS E:115 , ARG E:397
BINDING SITE FOR RESIDUE PO3 E 504
10
BC1
SOFTWARE
LYS E:22 , ASN E:23 , TRP E:95 , ALA E:119 , ARG E:120 , PRO E:121 , VAL E:122 , ASP E:123 , LEU E:124 , LYS E:160 , SER E:162 , VAL E:163 , GLY E:164 , ASP E:305 , VAL E:327 , LEU E:370 , ARG E:371 , HOH E:442 , HOH E:456
BINDING SITE FOR RESIDUE EPU E 605
11
BC2
SOFTWARE
ARG F:91 , ARG F:397
BINDING SITE FOR RESIDUE PO3 F 506
12
BC3
SOFTWARE
LYS F:22 , ASN F:23 , ALA F:119 , ARG F:120 , PRO F:121 , VAL F:122 , ASP F:123 , LEU F:124 , HIS F:125 , LYS F:160 , SER F:162 , VAL F:163 , GLY F:164 , ASP F:305 , VAL F:327 , PHE F:328 , LEU F:370 , HOH F:488 , HOH F:603
BINDING SITE FOR RESIDUE EPU F 606
13
BC4
SOFTWARE
ARG G:91 , CYS G:115 , ARG G:397
BINDING SITE FOR RESIDUE PO3 G 507
14
BC5
SOFTWARE
LYS G:22 , ASN G:23 , ALA G:92 , TRP G:95 , ALA G:119 , ARG G:120 , PRO G:121 , VAL G:122 , ASP G:123 , LEU G:124 , HIS G:125 , LYS G:160 , SER G:162 , VAL G:163 , GLY G:164 , ASP G:305 , VAL G:327 , ARG G:331 , LEU G:370
BINDING SITE FOR RESIDUE EPU G 607
15
BC6
SOFTWARE
ARG H:91 , CYS H:115 , ARG H:397
BINDING SITE FOR RESIDUE PO3 H 508
16
BC7
SOFTWARE
ASN H:23 , ALA H:119 , ARG H:120 , PRO H:121 , VAL H:122 , ASP H:123 , LEU H:124 , HIS H:125 , LYS H:160 , SER H:162 , VAL H:163 , GLY H:164 , ASP H:305 , VAL H:327 , PHE H:328 , ARG H:371 , HOH H:426 , HOH H:469
BINDING SITE FOR RESIDUE EPU H 608
17
BC8
SOFTWARE
ARG I:91 , CYS I:115 , ARG I:397
BINDING SITE FOR RESIDUE PO3 I 509
18
BC9
SOFTWARE
LYS I:22 , ASN I:23 , ALA I:119 , ARG I:120 , PRO I:121 , VAL I:122 , ASP I:123 , LEU I:124 , LYS I:160 , SER I:162 , VAL I:163 , GLY I:164 , ASP I:305 , VAL I:327 , PHE I:328 , LEU I:370 , HOH I:438
BINDING SITE FOR RESIDUE EPU I 609
19
CC1
SOFTWARE
MET J:90 , ARG J:91 , CYS J:115 , ARG J:397 , HOH J:764
BINDING SITE FOR RESIDUE PO3 J 510
20
CC2
SOFTWARE
LYS J:22 , ASN J:23 , TRP J:95 , ALA J:119 , ARG J:120 , PRO J:121 , VAL J:122 , ASP J:123 , LEU J:124 , HIS J:125 , LYS J:160 , SER J:162 , VAL J:163 , GLY J:164 , ASP J:305 , VAL J:327 , PHE J:328 , LEU J:370 , ARG J:371 , HOH J:443 , HOH J:673
BINDING SITE FOR RESIDUE EPU J 610
21
CC3
SOFTWARE
ARG K:91 , CYS K:115 , ARG K:397
BINDING SITE FOR RESIDUE PO3 K 511
22
CC4
SOFTWARE
LYS K:22 , ASN K:23 , ALA K:119 , ARG K:120 , PRO K:121 , VAL K:122 , ASP K:123 , LEU K:124 , HIS K:125 , LYS K:160 , SER K:162 , VAL K:163 , GLY K:164 , ASP K:305 , VAL K:327 , PHE K:328 , LEU K:370 , HOH K:424 , HOH K:425 , HOH K:427 , HOH K:444 , HOH K:457 , HOH K:477
BINDING SITE FOR RESIDUE EPU K 611
23
CC5
SOFTWARE
ARG L:91 , ARG L:397
BINDING SITE FOR RESIDUE PO3 L 512
24
CC6
SOFTWARE
LYS L:22 , ASN L:23 , ALA L:119 , ARG L:120 , PRO L:121 , VAL L:122 , ASP L:123 , LEU L:124 , LYS L:160 , VAL L:161 , SER L:162 , VAL L:163 , GLY L:164 , ASP L:305 , VAL L:327 , PHE L:328 , LEU L:370
BINDING SITE FOR RESIDUE EPU L 612
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
[
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
View:
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 12)
Info
All SCOP Domains
1a: SCOP_d3issa_ (A:)
1b: SCOP_d3isse_ (E:)
1c: SCOP_d3issf_ (F:)
1d: SCOP_d3issg_ (G:)
1e: SCOP_d3issh_ (H:)
1f: SCOP_d3issi_ (I:)
1g: SCOP_d3issj_ (J:)
1h: SCOP_d3issk_ (K:)
1i: SCOP_d3issl_ (L:)
1j: SCOP_d3issb_ (B:)
1k: SCOP_d3issc_ (C:)
1l: SCOP_d3issd_ (D:)
View:
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)
(
)
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)
(
)
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(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
IF3-like
(127)
Superfamily
:
EPT/RTPC-like
(82)
Family
:
Enolpyruvate transferase, EPT
(68)
Protein domain
:
automated matches
(15)
Escherichia coli K-12 [TaxId: 83333]
(8)
1a
d3issa_
A:
1b
d3isse_
E:
1c
d3issf_
F:
1d
d3issg_
G:
1e
d3issh_
H:
1f
d3issi_
I:
1g
d3issj_
J:
1h
d3issk_
K:
1i
d3issl_
L:
1j
d3issb_
B:
1k
d3issc_
C:
1l
d3issd_
D:
[
close SCOP info
]
CATH Domains
(1, 24)
Info
all CATH domains
1a: CATH_3issA01 (A:1-18,A:230-418)
1b: CATH_3issB01 (B:1-18,B:230-418)
1c: CATH_3issK01 (K:1-18,K:230-418)
1d: CATH_3issL01 (L:1-18,L:230-418)
1e: CATH_3issA02 (A:21-228)
1f: CATH_3issB02 (B:21-228)
1g: CATH_3issC02 (C:21-228)
1h: CATH_3issD02 (D:21-228)
1i: CATH_3issE02 (E:21-228)
1j: CATH_3issF02 (F:21-228)
1k: CATH_3issG02 (G:21-228)
1l: CATH_3issH02 (H:21-228)
1m: CATH_3issC01 (C:1-18,C:230-418)
1n: CATH_3issI02 (I:21-228)
1o: CATH_3issJ02 (J:21-228)
1p: CATH_3issK02 (K:21-228)
1q: CATH_3issL02 (L:21-228)
1r: CATH_3issD01 (D:1-18,D:230-418)
1s: CATH_3issE01 (E:1-18,E:230-418)
1t: CATH_3issF01 (F:1-18,F:230-418)
1u: CATH_3issG01 (G:1-18,G:230-418)
1v: CATH_3issH01 (H:1-18,H:230-418)
1w: CATH_3issI01 (I:1-18,I:230-418)
1x: CATH_3issJ01 (J:1-18,J:230-418)
View:
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Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-beta prism
(50)
Topology
:
UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain
(50)
Homologous Superfamily
:
[code=3.65.10.10, no name defined]
(47)
Escherichia coli k-12. Organism_taxid: 83333. Strain: k12.
(1)
1a
3issA01
A:1-18,A:230-418
1b
3issB01
B:1-18,B:230-418
1c
3issK01
K:1-18,K:230-418
1d
3issL01
L:1-18,L:230-418
1e
3issA02
A:21-228
1f
3issB02
B:21-228
1g
3issC02
C:21-228
1h
3issD02
D:21-228
1i
3issE02
E:21-228
1j
3issF02
F:21-228
1k
3issG02
G:21-228
1l
3issH02
H:21-228
1m
3issC01
C:1-18,C:230-418
1n
3issI02
I:21-228
1o
3issJ02
J:21-228
1p
3issK02
K:21-228
1q
3issL02
L:21-228
1r
3issD01
D:1-18,D:230-418
1s
3issE01
E:1-18,E:230-418
1t
3issF01
F:1-18,F:230-418
1u
3issG01
G:1-18,G:230-418
1v
3issH01
H:1-18,H:230-418
1w
3issI01
I:1-18,I:230-418
1x
3issJ01
J:1-18,J:230-418
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Asym.Unit (1.6 MB)
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Biol.Unit 1 (146 KB)
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Biol.Unit 10 (148 KB)
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Biol.Unit 11 (146 KB)
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