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3IPM
Asym. Unit
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Asym.Unit (714 KB)
Biol.Unit 1, α-C (1.4 MB)
Biol.Unit 1 (1.4 MB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ARCHAEAL 20S PROTEASOME IN COMPLEX WITH THE C-TERMINUS OF PAN
Authors
:
Y. Yu, Y. Cheng
Date
:
17 Aug 09 (Deposition) - 29 Dec 09 (Release) - 11 Aug 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
4.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U (2x)
Keywords
:
Proteasome, Proteasomal Atpase, Protein Degradation, Aaa Atpase, Electron Cryomicroscopy, Hydrolase, Protease, Threonine Protease, Hydrolase-Hydrolase Activator Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Yu, D. M. Smith, H. M. Kim, V. Rodriguez, A. L. Goldberg, Y. Cheng
Interactions Of Pan'S C-Termini With Archaeal 20S Proteasom And Implications For The Eukaryotic Proteasome-Atpase Interactions.
Embo J. V. 29 692 2010
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Hetero Components
(0, 0)
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Sites
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PROSITE Patterns/Profiles
(3, 21)
Info
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1: PROTEASOME_ALPHA_1 (A:8-30,B:8-30,C:8-30,D:8-30,E:8-30...)
2: PROTEASOME_BETA_1 (H:4-51,I:4-51,J:4-51,K:4-51,L:4-51...)
3: PROTEASOME_ALPHA_2 (A:23-233,B:23-233,C:23-233,D:23-23...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEASOME_ALPHA_1
PS00388
Proteasome alpha-type subunits signature.
PSA_THEAC
8-30
7
A:8-30
B:8-30
C:8-30
D:8-30
E:8-30
F:8-30
G:8-30
2
PROTEASOME_BETA_1
PS00854
Proteasome beta-type subunits signature.
PSB_THEAC
12-59
7
H:4-51
I:4-51
J:4-51
K:4-51
L:4-51
M:4-51
N:4-51
3
PROTEASOME_ALPHA_2
PS51475
Proteasome alpha-type subunit profile.
PSA_THEAC
23-233
7
A:23-233
B:23-233
C:23-233
D:23-233
E:23-233
F:23-233
G:23-233
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Exons
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SCOP Domains
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CATH Domains
(2, 21)
Info
all CATH domains
1a: CATH_3ipmA00 (A:7-233)
1b: CATH_3ipmB00 (B:7-233)
1c: CATH_3ipmC00 (C:7-233)
1d: CATH_3ipmD00 (D:7-233)
1e: CATH_3ipmE00 (E:7-233)
1f: CATH_3ipmF00 (F:7-233)
1g: CATH_3ipmG00 (G:7-233)
1h: CATH_3ipmH00 (H:1-203)
1i: CATH_3ipmI00 (I:1-203)
1j: CATH_3ipmJ00 (J:1-203)
1k: CATH_3ipmK00 (K:1-203)
1l: CATH_3ipmL00 (L:1-203)
1m: CATH_3ipmM00 (M:1-203)
1n: CATH_3ipmN00 (N:1-203)
2a: CATH_3ipmO01 (O:4-221)
2b: CATH_3ipmP01 (P:4-221)
2c: CATH_3ipmQ01 (Q:4-221)
2d: CATH_3ipmR01 (R:4-221)
2e: CATH_3ipmS01 (S:4-221)
2f: CATH_3ipmT01 (T:4-221)
2g: CATH_3ipmU01 (U:4-221)
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(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
4-Layer Sandwich
(459)
Topology
:
Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
(128)
Homologous Superfamily
:
Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
(124)
Thermoplasma acidophilum. Organism_taxid: 2303.
(6)
1a
3ipmA00
A:7-233
1b
3ipmB00
B:7-233
1c
3ipmC00
C:7-233
1d
3ipmD00
D:7-233
1e
3ipmE00
E:7-233
1f
3ipmF00
F:7-233
1g
3ipmG00
G:7-233
1h
3ipmH00
H:1-203
1i
3ipmI00
I:1-203
1j
3ipmJ00
J:1-203
1k
3ipmK00
K:1-203
1l
3ipmL00
L:1-203
1m
3ipmM00
M:1-203
1n
3ipmN00
N:1-203
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Four Helix Bundle (Hemerythrin (Met), subunit A)
(300)
Homologous Superfamily
:
[code=1.20.120.180, no name defined]
(10)
Thermoplasma acidophilum. Organism_taxid: 2303.
(5)
2a
3ipmO01
O:4-221
2b
3ipmP01
P:4-221
2c
3ipmQ01
Q:4-221
2d
3ipmR01
R:4-221
2e
3ipmS01
S:4-221
2f
3ipmT01
T:4-221
2g
3ipmU01
U:4-221
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Asymmetric Unit 1
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Asym.Unit (714 KB)
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