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3IMQ
Biol. Unit 1
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Asym.Unit (116 KB)
Biol.Unit 1 (39 KB)
Biol.Unit 2 (39 KB)
Biol.Unit 3 (38 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE NUSB101-S10(DELTA LOOP) COMPLEX
Authors
:
X. Luo, M. C. Wahl
Date
:
11 Aug 09 (Deposition) - 10 Nov 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,J,K,L
Biol. Unit 1: A,J (1x)
Biol. Unit 2: B,K (1x)
Biol. Unit 3: C,L (1x)
Keywords
:
Processive Transcription Antitermination; Transcription Termination; Transcription Factor; Protein-Protein Interaction; Protein-Rna Interaction, Rna-Binding, Transcription, Transcription Regulation, Transcription Termination, Ribonucleoprotein, Ribosomal Protein, Transcription Regulator - Ribosomal Protein Complex
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Gene Ontology, PubMed, Web (Google)
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Reference
:
B. M. Burmann, X. Luo, P. Rosch, M. C. Wahl, M. E. Gottesman
Fine Tuning Of The E. Coli Nusb:Nuse Complex Affinity To Boxa Rna Is Required For Processive Antitermination.
Nucleic Acids Res. V. 38 314 2010
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Hetero Components
(0, 0)
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All Hetero Components
1a: POTASSIUM ION (Ka)
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Sites
(1, 1)
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All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LEU A:35 , ALA A:36 , GLN A:38 , LEU C:35 , ALA C:36 , GLN C:38
BINDING SITE FOR RESIDUE K A 140
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_NUSB_ECOLI_001 (Y18D, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_NUSB_ECOLI_001
*
Y
18
D
NUSB_ECOLI
---
---
A
Y
18
D
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: RIBOSOMAL_S10 (J:29-44)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RIBOSOMAL_S10
PS00361
Ribosomal protein S10 signature.
RS10_ECOLI
29-44
1
J:29-44
-
-
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Exons
(0, 0)
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SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d3imqa_ (A:)
1b: SCOP_d3imqb_ (B:)
1c: SCOP_d3imqc_ (C:)
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Class
:
All alpha proteins
(14657)
Fold
:
NusB-like
(13)
Superfamily
:
NusB-like
(13)
Family
:
Antitermination factor NusB
(10)
Protein domain
:
automated matches
(3)
Escherichia coli K-12 [TaxId: 83333]
(3)
1a
d3imqa_
A:
1b
d3imqb_
B:
1c
d3imqc_
C:
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CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_3imqA00 (A:3-139)
1b: CATH_3imqB00 (B:3-139)
1c: CATH_3imqC00 (C:3-139)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
N-utilizing Substance Protein B Homolog; Chain A
(14)
Homologous Superfamily
:
N-utilizing Substance Protein B Homolog; Chain A
(14)
Escherichia coli k-12. Organism_taxid: 83333.
(1)
1a
3imqA00
A:3-139
1b
3imqB00
B:3-139
1c
3imqC00
C:3-139
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Pfam Domains
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Asym.Unit (116 KB)
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