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3IIM
Asym. Unit
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Asym.Unit (44 KB)
Biol.Unit 1 (36 KB)
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(1)
Title
:
THE STRUCTURE OF HCINAP-DADP COMPLEX AT 2.0 ANGSTROMS RESOLUTION
Authors
:
S. E. Zographos, C. E. Drakou, D. D. Leonidas
Date
:
02 Aug 09 (Deposition) - 06 Oct 10 (Release) - 18 Jan 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Alpha And Beta Proteins (A/B), Protein Binding, Transferase, Phosphotransferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. E. Drakou, A. Malekkou, J. M. Hayes, C. W. Lederer, D. D. Leonidas, N. G. Oikonomakos, A. I. Lamond, N. Santama, S. E. Zographos
Hcinap Is An Atypical Mammalian Nuclear Adenylate Kinase With An Atpase Motif: Structural And Functional Studies.
Proteins V. 80 206 2012
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Hetero Components
(4, 7)
Info
All Hetero Components
1a: 2'-DEOXYADENOSINE-5'-DIPHOSPHATE (DATa)
2a: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-D... (DTVa)
3a: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ET... (EPEa)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
View:
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Label:
No.
Name
Count
Type
Full Name
1
DAT
1
Ligand/Ion
2'-DEOXYADENOSINE-5'-DIPHOSPHATE
2
DTV
1
Ligand/Ion
(2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL
3
EPE
1
Ligand/Ion
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
4
SO4
4
Ligand/Ion
SULFATE ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLU A:40 , PRO A:85 , GLU A:86 , ARG A:87 , HOH A:336
BINDING SITE FOR RESIDUE DTV A 173
2
AC2
SOFTWARE
ARG A:96 , GLN A:126 , GLN A:143 , PRO A:145 , GLU A:164 , GLN A:165 , LYS A:168 , HOH A:242 , HOH A:261 , HOH A:316
BINDING SITE FOR RESIDUE EPE A 174
3
AC3
SOFTWARE
GLY A:13 , VAL A:14 , GLY A:15 , LYS A:16 , THR A:17 , THR A:18 , ARG A:105 , ARG A:109 , SER A:146 , ASN A:147 , LYS A:148 , PRO A:149 , LEU A:152 , HOH A:208 , HOH A:213 , HOH A:223 , HOH A:224 , HOH A:227 , HOH A:231
BINDING SITE FOR RESIDUE DAT A 175
4
AC4
SOFTWARE
GLU A:138 , HOH A:186 , HOH A:311 , HOH A:348
BINDING SITE FOR RESIDUE SO4 A 176
5
AC5
SOFTWARE
ILE A:91 , PHE A:93 , TRP A:162 , HOH A:244
BINDING SITE FOR RESIDUE SO4 A 177
6
AC6
SOFTWARE
TYR A:129 , VAL A:141 , HIS A:142 , GLN A:143 , HOH A:361 , HOH A:381
BINDING SITE FOR RESIDUE SO4 A 178
7
AC7
SOFTWARE
ASN A:112 , GLU A:113 , HOH A:199
BINDING SITE FOR RESIDUE SO4 A 179
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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;
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Sorry, no Info available
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Exons
(5, 5)
Info
All Exons
Exon 1.2b (A:1-10)
Exon 1.5b (A:10-41)
Exon 1.7 (A:41-60)
Exon 1.8 (A:61-109)
Exon 1.9d (A:109-172)
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All Exon Boundaries
1: Boundary -/1.2b
2: Boundary 1.2b/1.5b
3: Boundary 1.5b/1.7
4: Boundary 1.7/1.8
5: Boundary 1.8/1.9d
6: Boundary 1.9d/-
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2b
ENST00000380822
2b
ENSE00001867641
chr5:
68665369-68665290
80
KAD6_HUMAN
1-10
10
1
A:1-10
10
1.5b
ENST00000380822
5b
ENSE00001756532
chr5:
68662422-68662330
93
KAD6_HUMAN
10-41
32
1
A:10-41
32
1.7
ENST00000380822
7
ENSE00001486415
chr5:
68651780-68651722
59
KAD6_HUMAN
41-60
20
1
A:41-60
20
1.8
ENST00000380822
8
ENSE00001486410
chr5:
68651621-68651476
146
KAD6_HUMAN
61-109
49
1
A:61-109
49
1.9d
ENST00000380822
9d
ENSE00001549839
chr5:
68648080-68646811
1270
KAD6_HUMAN
109-172
64
1
A:109-172
64
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3iima_ (A:)
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(
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
Nucleotide and nucleoside kinases
(231)
Protein domain
:
automated matches
(25)
Human (Homo sapiens) [TaxId: 9606]
(7)
1a
d3iima_
A:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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