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3IFK
Asym. Unit
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Asym.Unit (35 KB)
Biol.Unit 1 (16 KB)
Biol.Unit 2 (16 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF CALCIUM-SATURATED CALMODULIN N-TERMINAL DOMAIN FRAGMENT, RESIDUES 1-90
Authors
:
T. J. Witt, R. A. Newman, M. A. Shea
Date
:
24 Jul 09 (Deposition) - 15 Dec 09 (Release) - 21 Mar 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.03
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Calmodulin, Ef Hand Motif, N-Terminal Domain, N-Domain, Residues 1- 90, Methylation, Phosphorylation, Metal Binding Protein, Isopeptide Bond, Phosphoprotein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. E. O'Donnell, R. A. Newman, T. J. Witt, R. Hultman, J. R. Froehlig, A. P. Christensen, M. A. Shea
Thermodynamics And Conformational Change Governing Domain-Domain Interactions Of Calmodulin.
Methods Enzymol. V. 466 503 2009
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
4
Ligand/Ion
CALCIUM ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:20 , ASP A:22 , ASP A:24 , THR A:26 , GLU A:31
BINDING SITE FOR RESIDUE CA A 91
2
AC2
SOFTWARE
ASP A:56 , ASP A:58 , ASN A:60 , THR A:62 , GLU A:67
BINDING SITE FOR RESIDUE CA A 92
3
AC3
SOFTWARE
ASP B:20 , ASP B:22 , ASP B:24 , THR B:26 , GLU B:31 , HOH B:115
BINDING SITE FOR RESIDUE CA B 91
4
AC4
SOFTWARE
ASP B:56 , ASP B:58 , ASN B:60 , THR B:62 , GLU B:67 , HOH B:103
BINDING SITE FOR RESIDUE CA B 92
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 10)
Info
All PROSITE Patterns/Profiles
1: EF_HAND_2 (A:7-42,B:7-42|A:43-78,B:43-78|A:80...)
2: EF_HAND_1 (A:20-32,B:20-32|A:56-68,B:56-68|-|...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
CALM3_RAT
8-43
44-79
81-116
117-149
6
A:7-42
B:7-42
A:43-78
B:43-78
A:80-89
B:80-89
-
CALM1_RAT
8-43
44-79
81-116
117-149
6
A:7-42
B:7-42
A:43-78
B:43-78
A:80-89
B:80-89
-
CALM2_RAT
8-43
44-79
81-116
117-149
6
A:7-42
B:7-42
A:43-78
B:43-78
A:80-89
B:80-89
-
2
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
CALM3_RAT
21-33
57-69
94-106
130-142
4
A:20-32
B:20-32
A:56-68
B:56-68
-
-
CALM1_RAT
21-33
57-69
94-106
130-142
4
A:20-32
B:20-32
A:56-68
B:56-68
-
-
CALM2_RAT
21-33
57-69
94-106
130-142
4
A:20-32
B:20-32
A:56-68
B:56-68
-
-
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Exons
(3, 6)
Info
All Exons
Exon 1.2 (A:3-11 | B:3-11)
Exon 1.3 (A:11-59 | B:11-59)
Exon 1.4 (A:59-89 | B:59-89)
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All Exon Boundaries
1: Boundary 1.1/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSRNOT00000022603
1
ENSRNOE00000444589
chr1:
77252808-77252705
104
CALM3_RAT
1-1
1
0
-
-
1.2
ENSRNOT00000022603
2
ENSRNOE00000354112
chr1:
77248702-77248672
31
CALM3_RAT
2-12
11
2
A:3-11
B:3-11
9
9
1.3
ENSRNOT00000022603
3
ENSRNOE00000337344
chr1:
77246477-77246334
144
CALM3_RAT
12-60
49
2
A:11-59
B:11-59
49
49
1.4
ENSRNOT00000022603
4
ENSRNOE00000316778
chr1:
77246246-77246140
107
CALM3_RAT
60-95
36
2
A:59-89
B:59-89
31
31
1.5
ENSRNOT00000022603
5
ENSRNOE00000294358
chr1:
77246001-77245866
136
CALM3_RAT
96-141
46
0
-
-
1.6
ENSRNOT00000022603
6
ENSRNOE00000161097
chr1:
77245776-77245475
302
CALM3_RAT
141-149
9
0
-
-
1.7
ENSRNOT00000022603
7
ENSRNOE00000437380
chr1:
77244456-77244169
288
CALM3_RAT
-
0
0
-
-
[
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SCOP Domains
(0, 0)
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CATH Domains
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Pfam Domains
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Sorry, no Info available
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