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3I6R
Asym. Unit
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Asym.Unit (69 KB)
Biol.Unit 1 (64 KB)
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(1)
Title
:
PLASMODIUM FALCIPARUM DIHYDROOROTATE DEHYDROGENASE BOUND WITH TRIAZOLOPYRIMIDINE-BASED INHIBITOR DSM74
Authors
:
X. Deng, M. A. Phillips
Date
:
07 Jul 09 (Deposition) - 28 Jul 09 (Release) - 20 Oct 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Plasmodium Falciparum, Dihydroorotate Dehydrogenase, Triazolopyrimidine, Inhibitor, Dsm74, Fad, Flavoprotein, Membrane, Mitochondrion, Mitochondrion Inner Membrane, Oxidoreductase, Pyrimidine Biosynthesis, Transit Peptide
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
X. Deng, R. Gujjar, F. El Mazouni, W. Kaminsky, N. A. Malmquist, E. J. Goldsmith, P. K. Rathod, M. A. Phillips
Structural Plasticity Of Malaria Dihydroorotate Dehydrogenase Allows Selective Binding Of Diverse Chemical Scaffolds.
J. Biol. Chem. V. 284 26999 2009
(for further references see the
PDB file header
)
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Hetero Components
(3, 3)
Info
All Hetero Components
1a: FLAVIN MONONUCLEOTIDE (FMNa)
2a: 5-METHYL-N-[4-(TRIFLUOROMETHYL)PHE... (J5Za)
3a: OROTIC ACID (OROa)
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No.
Name
Count
Type
Full Name
1
FMN
1
Ligand/Ion
FLAVIN MONONUCLEOTIDE
2
J5Z
1
Ligand/Ion
5-METHYL-N-[4-(TRIFLUOROMETHYL)PHENYL][1,2,4]TRIAZOLO[1,5-A]PYRIMIDIN-7-AMINE
3
ORO
1
Ligand/Ion
OROTIC ACID
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Sites
(3, 3)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:181 , CYS A:184 , HIS A:185 , PHE A:188 , PHE A:227 , LEU A:240 , ARG A:265 , LEU A:531 , VAL A:532 , MET A:536
BINDING SITE FOR RESIDUE J5Z A 1001
2
AC2
SOFTWARE
HOH A:10 , HOH A:11 , HOH A:22 , ALA A:224 , ALA A:225 , GLY A:226 , LYS A:229 , THR A:249 , ASN A:274 , ASN A:342 , LYS A:429 , SER A:457 , ASN A:458 , SER A:477 , GLY A:478 , SER A:505 , GLY A:506 , GLY A:507 , TYR A:528 , SER A:529 , ORO A:1003
BINDING SITE FOR RESIDUE FMN A 1002
3
AC3
SOFTWARE
LYS A:229 , ASN A:274 , CYS A:276 , GLY A:277 , PHE A:278 , ASN A:342 , SER A:345 , ASN A:347 , ASN A:458 , THR A:459 , FMN A:1002
BINDING SITE FOR RESIDUE ORO A 1003
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(2, 2)
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1: DHODEHASE_1 (A:243-262)
2: DHODEHASE_2 (A:502-522)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
DHODEHASE_1
PS00911
Dihydroorotate dehydrogenase signature 1.
PYRD_PLAF7
243-262
1
A:243-262
2
DHODEHASE_2
PS00912
Dihydroorotate dehydrogenase signature 2.
PYRD_PLAF7
502-522
1
A:502-522
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Exons
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CATH Domains
(1, 1)
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1a: CATH_3i6rA00 (A:161-566)
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Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Aldolase class I
(887)
Plasmodium falciparum 3d7. Organism_taxid: 36329.
(3)
1a
3i6rA00
A:161-566
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Chain A
Asymmetric Unit 1
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Asym.Unit (69 KB)
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