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3I6A
Biol. Unit 1
Info
Asym.Unit (307 KB)
Biol.Unit 1 (79 KB)
Biol.Unit 2 (79 KB)
Biol.Unit 3 (77 KB)
Biol.Unit 4 (77 KB)
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(1)
Title
:
HUMAN GST A1-1 GIMF MUTANT WITH GLUTATHIONE
Authors
:
L. M. Balogh, I. Le Trong, R. E. Stenkamp, W. M. Atkins
Date
:
06 Jul 09 (Deposition) - 01 Sep 09 (Release) - 21 Dec 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.98
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Keywords
:
Human Gst A1-1, Enzyme, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. M. Balogh, I. Le Trong, K. A. Kripps, K. Tars, R. E. Stenkamp, B. Mannervik, W. M. Atkins
Structural Analysis Of A Glutathione Transferase A1-1 Mutan Tailored For High Catalytic Efficiency With Toxic Alkenals.
Biochemistry V. 48 7698 2009
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: GLUTATHIONE (GSHa)
1b: GLUTATHIONE (GSHb)
1c: GLUTATHIONE (GSHc)
1d: GLUTATHIONE (GSHd)
1e: GLUTATHIONE (GSHe)
1f: GLUTATHIONE (GSHf)
1g: GLUTATHIONE (GSHg)
1h: GLUTATHIONE (GSHh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GSH
2
Ligand/Ion
GLUTATHIONE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR A:9 , ARG A:15 , ARG A:45 , GLN A:54 , VAL A:55 , PRO A:56 , GLN A:67 , THR A:68 , PHE A:220 , HOH A:6009 , HOH A:6345 , HOH A:6498 , ASP B:101 , ARG B:131
BINDING SITE FOR RESIDUE GSH A 5101
2
AC2
SOFTWARE
ASP A:101 , ARG A:131 , TYR B:9 , ARG B:45 , GLN B:54 , VAL B:55 , PRO B:56 , GLN B:67 , THR B:68 , PHE B:220 , HOH B:6011
BINDING SITE FOR RESIDUE GSH B 5102
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SAPs(SNPs)/Variants
(3, 6)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_033978 (T19I, chain A/B, )
2: VAR_049482 (P113Q, chain A/B, )
3: VAR_049483 (K117Q, chain A/B, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_033978
T
19
I
GSTA1_HUMAN
Polymorphism
1051578
A/B
T
19
I
2
UniProt
VAR_049482
P
113
Q
GSTA1_HUMAN
Polymorphism
1051745
A/B
P
113
Q
3
UniProt
VAR_049483
K
117
Q
GSTA1_HUMAN
Polymorphism
1051757
A/B
K
117
Q
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: GST_NTER (A:3-83,B:3-83)
2: GST_CTER (A:85-207,B:85-207)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GST_NTER
PS50404
Soluble glutathione S-transferase N-terminal domain profile.
GSTA1_HUMAN
3-83
2
A:3-83
B:3-83
-
-
-
-
-
2
GST_CTER
PS50405
Soluble glutathione S-transferase C-terminal domain profile.
GSTA1_HUMAN
85-207
2
A:85-207
B:85-207
-
-
-
-
-
-
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 16)
Info
All SCOP Domains
1a: SCOP_d3i6aa2 (A:81-220)
1b: SCOP_d3i6ab2 (B:81-222)
1c: SCOP_d3i6ac2 (C:81-220)
1d: SCOP_d3i6ad2 (D:81-220)
1e: SCOP_d3i6ae2 (E:81-220)
1f: SCOP_d3i6af2 (F:81-220)
1g: SCOP_d3i6ag2 (G:81-220)
1h: SCOP_d3i6ah2 (H:81-220)
2a: SCOP_d3i6aa1 (A:2-80)
2b: SCOP_d3i6ab1 (B:2-80)
2c: SCOP_d3i6ac1 (C:2-80)
2d: SCOP_d3i6ad1 (D:2-80)
2e: SCOP_d3i6ae1 (E:2-80)
2f: SCOP_d3i6af1 (F:4-80)
2g: SCOP_d3i6ag1 (G:2-80)
2h: SCOP_d3i6ah1 (H:2-80)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
GST C-terminal domain-like
(353)
Superfamily
:
GST C-terminal domain-like
(353)
Family
:
Glutathione S-transferase (GST), C-terminal domain
(263)
Protein domain
:
Class alpha GST
(53)
Human (Homo sapiens), (a1-1) [TaxId: 9606]
(27)
1a
d3i6aa2
A:81-220
1b
d3i6ab2
B:81-222
1c
d3i6ac2
C:81-220
1d
d3i6ad2
D:81-220
1e
d3i6ae2
E:81-220
1f
d3i6af2
F:81-220
1g
d3i6ag2
G:81-220
1h
d3i6ah2
H:81-220
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
Glutathione S-transferase (GST), N-terminal domain
(216)
Protein domain
:
Class alpha GST
(53)
Human (Homo sapiens), (a1-1) [TaxId: 9606]
(27)
2a
d3i6aa1
A:2-80
2b
d3i6ab1
B:2-80
2c
d3i6ac1
C:2-80
2d
d3i6ad1
D:2-80
2e
d3i6ae1
E:2-80
2f
d3i6af1
F:4-80
2g
d3i6ag1
G:2-80
2h
d3i6ah1
H:2-80
[
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CATH Domains
(2, 16)
Info
all CATH domains
1a: CATH_3i6aB01 (B:2-81,B:191-222)
1b: CATH_3i6aA01 (A:2-81,A:191-220)
1c: CATH_3i6aC01 (C:2-81,C:191-220)
1d: CATH_3i6aD01 (D:2-81,D:191-220)
1e: CATH_3i6aE01 (E:2-81,E:191-220)
1f: CATH_3i6aG01 (G:2-81,G:191-220)
1g: CATH_3i6aH01 (H:2-81,H:191-220)
1h: CATH_3i6aF01 (F:4-81,F:191-220)
2a: CATH_3i6aA02 (A:82-190)
2b: CATH_3i6aB02 (B:82-190)
2c: CATH_3i6aC02 (C:82-190)
2d: CATH_3i6aD02 (D:82-190)
2e: CATH_3i6aE02 (E:82-190)
2f: CATH_3i6aF02 (F:82-190)
2g: CATH_3i6aG02 (G:82-190)
2h: CATH_3i6aH02 (H:82-190)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Glutaredoxin
(620)
Homologous Superfamily
:
Glutaredoxin
(617)
Human (Homo sapiens)
(186)
1a
3i6aB01
B:2-81,B:191-222
1b
3i6aA01
A:2-81,A:191-220
1c
3i6aC01
C:2-81,C:191-220
1d
3i6aD01
D:2-81,D:191-220
1e
3i6aE01
E:2-81,E:191-220
1f
3i6aG01
G:2-81,G:191-220
1g
3i6aH01
H:2-81,H:191-220
1h
3i6aF01
F:4-81,F:191-220
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2
(267)
Homologous Superfamily
:
[code=1.20.1050.10, no name defined]
(249)
Human (Homo sapiens)
(119)
2a
3i6aA02
A:82-190
2b
3i6aB02
B:82-190
2c
3i6aC02
C:82-190
2d
3i6aD02
D:82-190
2e
3i6aE02
E:82-190
2f
3i6aF02
F:82-190
2g
3i6aG02
G:82-190
2h
3i6aH02
H:82-190
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Asymmetric Unit 1
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Asym.Unit (307 KB)
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