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3I69
Biol. Unit 1
Info
Asym.Unit (296 KB)
Biol.Unit 1 (77 KB)
Biol.Unit 2 (77 KB)
Biol.Unit 3 (75 KB)
Biol.Unit 4 (75 KB)
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(1)
Title
:
APO GLUTATHIONE TRANSFERASE A1-1 GIMF-HELIX MUTANT
Authors
:
L. M. Balogh, I. Le Trong, R. E. Stenkamp, W. M. Atkins
Date
:
06 Jul 09 (Deposition) - 01 Sep 09 (Release) - 21 Dec 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.38
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Keywords
:
Human Gst A1-1, Enzyme, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. M. Balogh, I. Le Trong, K. A. Kripps, K. Tars, R. E. Stenkamp, B. Mannervik, W. M. Atkins
Structural Analysis Of A Glutathione Transferase A1-1 Mutan Tailored For High Catalytic Efficiency With Toxic Alkenals.
Biochemistry V. 48 7698 2009
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: GLUTATHIONE (GSHa)
1b: GLUTATHIONE (GSHb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
GSH
1
Ligand/Ion
GLUTATHIONE
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:101 , ARG A:131 , HOH A:6029 , TYR B:9 , ARG B:15 , ARG B:45 , GLN B:54 , VAL B:55 , PRO B:56 , GLN B:67 , THR B:68 , PHE B:220 , HOH B:6009
BINDING SITE FOR RESIDUE GSH B 5102
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SAPs(SNPs)/Variants
(3, 6)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_033978 (T19I, chain A/B, )
2: VAR_049482 (P113Q, chain A/B, )
3: VAR_049483 (K117Q, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_033978
T
19
I
GSTA1_HUMAN
Polymorphism
1051578
A/B
T
19
I
2
UniProt
VAR_049482
P
113
Q
GSTA1_HUMAN
Polymorphism
1051745
A/B
P
113
Q
3
UniProt
VAR_049483
K
117
Q
GSTA1_HUMAN
Polymorphism
1051757
A/B
K
117
Q
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: GST_NTER (A:3-83,B:3-83)
2: GST_CTER (A:85-207,B:85-207)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GST_NTER
PS50404
Soluble glutathione S-transferase N-terminal domain profile.
GSTA1_HUMAN
3-83
2
A:3-83
B:3-83
-
-
-
-
-
2
GST_CTER
PS50405
Soluble glutathione S-transferase C-terminal domain profile.
GSTA1_HUMAN
85-207
2
A:85-207
B:85-207
-
-
-
-
-
-
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 16)
Info
All SCOP Domains
1a: SCOP_d3i69a2 (A:81-220)
1b: SCOP_d3i69b2 (B:81-222)
1c: SCOP_d3i69c2 (C:81-220)
1d: SCOP_d3i69d2 (D:81-220)
1e: SCOP_d3i69e2 (E:81-220)
1f: SCOP_d3i69f2 (F:81-219)
1g: SCOP_d3i69g2 (G:81-220)
1h: SCOP_d3i69h2 (H:81-220)
2a: SCOP_d3i69a1 (A:2-80)
2b: SCOP_d3i69b1 (B:2-80)
2c: SCOP_d3i69c1 (C:2-80)
2d: SCOP_d3i69d1 (D:2-80)
2e: SCOP_d3i69e1 (E:2-80)
2f: SCOP_d3i69f1 (F:4-80)
2g: SCOP_d3i69g1 (G:2-80)
2h: SCOP_d3i69h1 (H:2-80)
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Families
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(
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
GST C-terminal domain-like
(353)
Superfamily
:
GST C-terminal domain-like
(353)
Family
:
Glutathione S-transferase (GST), C-terminal domain
(263)
Protein domain
:
Class alpha GST
(53)
Human (Homo sapiens), (a1-1) [TaxId: 9606]
(27)
1a
d3i69a2
A:81-220
1b
d3i69b2
B:81-222
1c
d3i69c2
C:81-220
1d
d3i69d2
D:81-220
1e
d3i69e2
E:81-220
1f
d3i69f2
F:81-219
1g
d3i69g2
G:81-220
1h
d3i69h2
H:81-220
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
Glutathione S-transferase (GST), N-terminal domain
(216)
Protein domain
:
Class alpha GST
(53)
Human (Homo sapiens), (a1-1) [TaxId: 9606]
(27)
2a
d3i69a1
A:2-80
2b
d3i69b1
B:2-80
2c
d3i69c1
C:2-80
2d
d3i69d1
D:2-80
2e
d3i69e1
E:2-80
2f
d3i69f1
F:4-80
2g
d3i69g1
G:2-80
2h
d3i69h1
H:2-80
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CATH Domains
(2, 16)
Info
all CATH domains
1a: CATH_3i69B01 (B:2-81,B:191-222)
1b: CATH_3i69A01 (A:2-81,A:191-220)
1c: CATH_3i69C01 (C:2-81,C:191-220)
1d: CATH_3i69D01 (D:2-81,D:191-220)
1e: CATH_3i69E01 (E:2-81,E:191-220)
1f: CATH_3i69G01 (G:2-81,G:191-220)
1g: CATH_3i69H01 (H:2-81,H:191-220)
1h: CATH_3i69F01 (F:4-81,F:191-219)
2a: CATH_3i69A02 (A:82-190)
2b: CATH_3i69B02 (B:82-190)
2c: CATH_3i69C02 (C:82-190)
2d: CATH_3i69D02 (D:82-190)
2e: CATH_3i69E02 (E:82-190)
2f: CATH_3i69F02 (F:82-190)
2g: CATH_3i69G02 (G:82-190)
2h: CATH_3i69H02 (H:82-190)
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Homologous Superfamilies
(
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(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Glutaredoxin
(620)
Homologous Superfamily
:
Glutaredoxin
(617)
Human (Homo sapiens)
(186)
1a
3i69B01
B:2-81,B:191-222
1b
3i69A01
A:2-81,A:191-220
1c
3i69C01
C:2-81,C:191-220
1d
3i69D01
D:2-81,D:191-220
1e
3i69E01
E:2-81,E:191-220
1f
3i69G01
G:2-81,G:191-220
1g
3i69H01
H:2-81,H:191-220
1h
3i69F01
F:4-81,F:191-219
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2
(267)
Homologous Superfamily
:
[code=1.20.1050.10, no name defined]
(249)
Human (Homo sapiens)
(119)
2a
3i69A02
A:82-190
2b
3i69B02
B:82-190
2c
3i69C02
C:82-190
2d
3i69D02
D:82-190
2e
3i69E02
E:82-190
2f
3i69F02
F:82-190
2g
3i69G02
G:82-190
2h
3i69H02
H:82-190
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Asymmetric Unit 1
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Asym.Unit (296 KB)
Header - Asym.Unit
Biol.Unit 1 (77 KB)
Header - Biol.Unit 1
Biol.Unit 2 (77 KB)
Header - Biol.Unit 2
Biol.Unit 3 (75 KB)
Header - Biol.Unit 3
Biol.Unit 4 (75 KB)
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