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3I2K
Biol. Unit 1
Info
Asym.Unit (123 KB)
Biol.Unit 1 (233 KB)
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(1)
Title
:
COCAINE ESTERASE, WILD TYPE, BOUND TO A DTT ADDUCT
Authors
:
J. J. G. Tesmer, M. R. Nance
Date
:
29 Jun 09 (Deposition) - 16 Jun 10 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.51
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Alpha/Beta Hydrolase, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Narasimhan, M. R. Nance, D. Gao, M. C. Ko, J. Macdonald, P. Tamburi, D. Yoon, D. M. Landry, J. H. Woods, C. G. Zhan, J. J. Tesmer, R. K. Sunahar
Structural Analysis Of Thermostabilizing Mutations Of Cocaine Esterase.
Protein Eng. Des. Sel. V. 23 537 2010
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Hetero Components
(3, 10)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
2a: (4S,5S)-4,5-BIS(MERCAPTOMETHYL)-1,... (DBCa)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
4a: SULFATE ION (SO4a)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
DBC
2
Ligand/Ion
(4S,5S)-4,5-BIS(MERCAPTOMETHYL)-1,3-DIOXOLAN-2-OL
3
GOL
6
Ligand/Ion
GLYCEROL
4
SO4
2
Ligand/Ion
SULFATE ION
[
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LYS A:298 , ARG A:472
BINDING SITE FOR RESIDUE CL A 588
02
AC2
SOFTWARE
ARG A:75 , GLY A:82 , GLU A:83 , HOH A:1020
BINDING SITE FOR RESIDUE CL A 589
03
AC3
SOFTWARE
TRP A:345 , HOH A:748 , HOH A:1010 , HOH A:1461
BINDING SITE FOR RESIDUE CL A 590
04
AC4
SOFTWARE
TYR A:44 , SER A:117 , TYR A:118 , TRP A:166 , HIS A:287 , LEU A:407 , HOH A:776 , HOH A:1060
BINDING SITE FOR RESIDUE DBC A 591
05
AC5
SOFTWARE
LEU A:196 , ASN A:197 , VAL A:199 , ARG A:293 , PHE A:408 , HIS A:409 , ASN A:410 , HOH A:909 , HOH A:1223
BINDING SITE FOR RESIDUE GOL A 592
06
AC6
SOFTWARE
ASP A:394 , ALA A:396 , LEU A:547 , MET A:550 , CYS A:551 , THR A:552 , HOH A:1260
BINDING SITE FOR RESIDUE GOL A 593
07
AC7
SOFTWARE
PRO A:306 , GLU A:309 , ALA A:310 , ARG A:336 , TRP A:345 , HOH A:1015 , HOH A:1076 , HOH A:1094 , HOH A:1194
BINDING SITE FOR RESIDUE GOL A 594
08
AC8
SOFTWARE
GLY A:364 , GLY A:365 , SER A:383 , GLY A:384 , THR A:385 , ARG A:559 , HOH A:754 , HOH A:826 , HOH A:935 , HOH A:1077 , HOH A:1216 , HOH A:1426
BINDING SITE FOR RESIDUE SO4 A 595
09
AC9
SOFTWARE
ARG A:556
BINDING SITE FOR RESIDUE CL A 596
10
BC1
SOFTWARE
ARG A:182
BINDING SITE FOR RESIDUE CL A 597
11
BC2
SOFTWARE
HIS A:563 , HOH A:1439
BINDING SITE FOR RESIDUE CL A 598
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d3i2ka2 (A:352-575)
2a: SCOP_d3i2ka1 (A:2-351)
View:
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Galactose-binding domain-like
(314)
Superfamily
:
Galactose-binding domain-like
(314)
Family
:
automated matches
(85)
Protein domain
:
automated matches
(85)
Rhodococcus sp. [TaxId: 104109]
(8)
1a
d3i2ka2
A:352-575
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
alpha/beta-Hydrolases
(971)
Superfamily
:
alpha/beta-Hydrolases
(971)
Family
:
PepX catalytic domain-like
(19)
Protein domain
:
automated matches
(9)
Rhodococcus sp. [TaxId: 104109]
(8)
2a
d3i2ka1
A:2-351
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CATH Domains
(3, 3)
Info
all CATH domains
1a: CATH_3i2kA01 (A:2-145,A:241-348)
2a: CATH_3i2kA02 (A:146-240)
3a: CATH_3i2kA03 (A:357-575)
View:
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Classes
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)
(
)
Architectures
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)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.1820, no name defined]
(692)
Mb1 'bresler 1999' (Rhodococcus sp)
(6)
1a
3i2kA01
A:2-145,A:241-348
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
alpha-amino acid ester hydrolase ( Helical cap domain)
(16)
Homologous Superfamily
:
alpha-amino acid ester hydrolase ( Helical cap domain)
(16)
Mb1 'bresler 1999' (Rhodococcus sp)
(6)
2a
3i2kA02
A:146-240
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
Galactose-binding domain-like
(195)
Mb1 'bresler 1999' (Rhodococcus sp)
(6)
3a
3i2kA03
A:357-575
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Protein & NOT Variant
Protein & NOT Site
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Chain A
Asymmetric Unit 1
Asymmetric Unit 2
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Show PDB file:
Asym.Unit (123 KB)
Header - Asym.Unit
Biol.Unit 1 (233 KB)
Header - Biol.Unit 1
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