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Getting 'Biological Unit' information from database.
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Getting 'Hetero Component' information from database.
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3HU3
Asym. Unit
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Asym.Unit (155 KB)
Biol.Unit 1 (441 KB)
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(1)
Title
:
STRUCTURE OF P97 N-D1 R155H MUTANT IN COMPLEX WITH ATPGS
Authors
:
W. -K. Tang
Date
:
12 Jun 09 (Deposition) - 16 Jun 10 (Release) - 15 Feb 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (3x)
Keywords
:
P97, Vcp, Transport Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
W. K. Tang, D. Li, C. C. Li, L. Esser, R. Dai, L. Guo, D. Xia
A Novel Atp-Dependent Conformation In P97 N-D1 Fragment Revealed By Crystal Structures Of Disease-Related Mutants.
Embo J. V. 29 2217 2010
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLA... (AGSa)
1b: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLA... (AGSb)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
AGS
2
Ligand/Ion
PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
2
MG
2
Ligand/Ion
MAGNESIUM ION
[
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:205 , GLY A:207 , GLY A:248 , THR A:249 , GLY A:250 , LYS A:251 , THR A:252 , LEU A:253 , ASN A:348 , ILE A:380 , HIS A:384 , GLY A:408 , ALA A:409 , MG A:801 , HOH A:802 , HOH A:803 , HOH A:804 , HOH A:894 , HOH A:953 , HOH A:955
BINDING SITE FOR RESIDUE AGS A 800
2
AC2
SOFTWARE
THR A:252 , AGS A:800 , HOH A:802 , HOH A:803 , HOH A:804
BINDING SITE FOR RESIDUE MG A 801
3
AC3
SOFTWARE
ARG A:359 , PHE A:360 , ASP B:205 , GLY B:207 , PRO B:247 , GLY B:248 , THR B:249 , GLY B:250 , LYS B:251 , THR B:252 , LEU B:253 , ASN B:348 , ILE B:380 , HIS B:384 , GLY B:408 , ALA B:409 , MG B:801 , HOH B:802 , HOH B:803 , HOH B:804 , HOH B:872 , HOH B:909 , HOH B:910
BINDING SITE FOR RESIDUE AGS B 800
4
AC4
SOFTWARE
THR B:252 , AGS B:800 , HOH B:802 , HOH B:803 , HOH B:804
BINDING SITE FOR RESIDUE MG B 801
[
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SAPs(SNPs)/Variants
(8, 16)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_033016 (R95G, chain A/B, )
2: VAR_033017 (H155C, chain A/B, )
3: VAR_033018 (H155H, chain A/B, )
4: VAR_033019 (H155P, chain A/B, )
5: VAR_065910 (R159G, chain A/B, )
6: VAR_033020 (R159H, chain A/B, )
7: VAR_033021 (R191Q, chain A/B, )
8: VAR_033022 (A232E, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_033016
R
95
G
TERA_HUMAN
Disease (IBMPFD1)
---
A/B
R
95
G
2
UniProt
VAR_033017
R
155
C
TERA_HUMAN
Disease (IBMPFD1)
---
A/B
H
155
C
3
UniProt
VAR_033018
R
155
H
TERA_HUMAN
Disease (IBMPFD1)
---
A/B
H
155
H
4
UniProt
VAR_033019
R
155
P
TERA_HUMAN
Disease (IBMPFD1)
---
A/B
H
155
P
5
UniProt
VAR_065910
R
159
G
TERA_HUMAN
Disease (ALS14)
---
A/B
R
159
G
6
UniProt
VAR_033020
R
159
H
TERA_HUMAN
Disease (IBMPFD1)
---
A/B
R
159
H
7
UniProt
VAR_033021
R
191
Q
TERA_HUMAN
Disease (IBMPFD1)
---
A/B
R
191
Q
8
UniProt
VAR_033022
A
232
E
TERA_HUMAN
Disease (IBMPFD1)
---
A/B
A
232
E
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: AAA (A:341-359,B:341-359|-)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
AAA
PS00674
AAA-protein family signature.
TERA_HUMAN
341-359
617-635
2
A:341-359
B:341-359
-
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(3, 6)
Info
All SCOP Domains
1a: SCOP_d3hu3a1 (A:17-106)
1b: SCOP_d3hu3b1 (B:17-106)
2a: SCOP_d3hu3a2 (A:107-200)
2b: SCOP_d3hu3b2 (B:107-200)
3a: SCOP_d3hu3a3 (A:201-469)
3b: SCOP_d3hu3b3 (B:201-462)
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Protein Domains
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(
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Organisms
(
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(
)
Class
:
All beta proteins
(24004)
Fold
:
Double psi beta-barrel
(111)
Superfamily
:
ADC-like
(88)
Family
:
automated matches
(19)
Protein domain
:
automated matches
(19)
Human (Homo sapiens) [TaxId: 9606]
(6)
1a
d3hu3a1
A:17-106
1b
d3hu3b1
B:17-106
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Cdc48 domain 2-like
(22)
Superfamily
:
Cdc48 domain 2-like
(22)
Family
:
automated matches
(6)
Protein domain
:
automated matches
(6)
Human (Homo sapiens) [TaxId: 9606]
(6)
2a
d3hu3a2
A:107-200
2b
d3hu3b2
B:107-200
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
Extended AAA-ATPase domain
(92)
Protein domain
:
automated matches
(8)
Human (Homo sapiens) [TaxId: 9606]
(6)
3a
d3hu3a3
A:201-469
3b
d3hu3b3
B:201-462
[
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
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Pfam Domains
(0, 0)
Info
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Sorry, no Info available
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Protein & NOT Site
Protein & NOT PROSITE
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Chain B
Asymmetric Unit 1
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Asym.Unit (155 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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