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3HOB
Biol. Unit 2
Info
Asym.Unit (57 KB)
Biol.Unit 1 (28 KB)
Biol.Unit 2 (28 KB)
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Title
:
FACTOR VIII TRP2313-HIS2315 SEGMENT IS INVOLVED IN MEMBRANE BINDING AS SHOWN BY CRYSTAL STRUCTURE OF COMPLEX BETWEEN FACTOR VIII C2 DOMAIN AND AN INHIBITOR
Authors
:
Z. Liu, C. Yuan
Date
:
01 Jun 09 (Deposition) - 19 Jan 10 (Release) - 28 Apr 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.07
Chains
:
Asym. Unit : A,M
Biol. Unit 1: M (1x)
Biol. Unit 2: A (1x)
Keywords
:
Blood Clotting, Acute Phase, Blood Coagulation, Calcium, Disease Mutation, Disulfide Bond, Glycoprotein, Hemophilia, Metal-Binding, Pharmaceutical, Polymorphism, Secreted, Sulfation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Z. Liu, L. Lin, C. Yuan, G. A. Nicolaes, L. Chen, E. J. Meehan, B. Furie, B. Furie, M. Huang
Trp2313-His2315 Of Factor Viii C2 Domain Is Involved In Membrane Binding: Structure Of A Complex Between The C2 Domain And An Inhibitor Of Membrane Binding.
J. Biol. Chem. V. 285 8824 2010
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(49, 49)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
01: VAR_028689 (S2173I, chain A, )
02: VAR_017341 (C2174G, chain A, )
03: VAR_028690 (P2177R, chain A, )
04: VAR_028691 (G2179V, chain A, )
05: VAR_028692 (E2181D, chain A, )
06: VAR_001197 (I2185T, chain A, )
07: VAR_001198 (I2190N, chain A, )
08: VAR_001199 (A2192P, chain A, )
09: VAR_028693 (A2201P, chain A, )
10: VAR_028695 (P2205L, chain A, )
11: VAR_001201 (R2209G, chain A, )
12: VAR_001202 (R2209L, chain A, )
13: VAR_028696 (R2209P, chain A, )
14: VAR_001203 (R2209Q, chain A, )
15: VAR_028697 (L2210F, chain A, )
16: VAR_001204 (V2223M, chain A, )
17: VAR_001205 (W2229C, chain A, )
18: VAR_028698 (W2229S, chain A, )
19: VAR_028699 (V2232A, chain A, )
20: VAR_028700 (V2232E, chain A, )
21: VAR_021356 (M2238V, chain A, )
22: VAR_028701 (T2245A, chain A, )
23: VAR_001206 (Q2246R, chain A, )
24: VAR_028702 (F2260C, chain A, )
25: VAR_028703 (F2260I, chain A, )
26: VAR_028704 (I2262T, chain A, )
27: VAR_065323 (D2267G, chain A, )
28: VAR_028705 (W2271L, chain A, )
29: VAR_028706 (G2285V, chain A, )
30: VAR_015134 (D2288A, chain A, )
31: VAR_001207 (P2300L, chain A, )
32: VAR_001208 (P2300S, chain A, )
33: VAR_001209 (R2304C, chain A, )
34: VAR_028707 (R2304G, chain A, )
35: VAR_001210 (R2304H, chain A, )
36: VAR_028708 (R2304L, chain A, )
37: VAR_028709 (R2307G, chain A, )
38: VAR_001211 (R2307L, chain A, )
39: VAR_028710 (R2307P, chain A, )
40: VAR_001212 (R2307Q, chain A, )
41: VAR_028711 (Q2311P, chain A, )
42: VAR_028712 (W2313R, chain A, )
43: VAR_065324 (I2317F, chain A, )
44: VAR_028713 (R2320T, chain A, )
45: VAR_008968 (G2325C, chain A, )
46: VAR_065325 (G2325D, chain A, )
47: VAR_028714 (G2325S, chain A, )
48: VAR_028715 (C2326S, chain A, )
49: VAR_028716 (C2326Y, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_028689
S
2192
I
FA8_HUMAN
Disease (HEMA)
---
A
S
2173
I
02
UniProt
VAR_017341
C
2193
G
FA8_HUMAN
Disease (HEMA)
---
A
C
2174
G
03
UniProt
VAR_028690
P
2196
R
FA8_HUMAN
Disease (HEMA)
---
A
P
2177
R
04
UniProt
VAR_028691
G
2198
V
FA8_HUMAN
Disease (HEMA)
---
A
G
2179
V
05
UniProt
VAR_028692
E
2200
D
FA8_HUMAN
Disease (HEMA)
---
A
E
2181
D
06
UniProt
VAR_001197
I
2204
T
FA8_HUMAN
Disease (HEMA)
---
A
I
2185
T
07
UniProt
VAR_001198
I
2209
N
FA8_HUMAN
Disease (HEMA)
---
A
I
2190
N
08
UniProt
VAR_001199
A
2211
P
FA8_HUMAN
Disease (HEMA)
---
A
A
2192
P
09
UniProt
VAR_028693
A
2220
P
FA8_HUMAN
Disease (HEMA)
---
A
A
2201
P
10
UniProt
VAR_028695
P
2224
L
FA8_HUMAN
Disease (HEMA)
---
A
P
2205
L
11
UniProt
VAR_001201
R
2228
G
FA8_HUMAN
Disease (HEMA)
---
A
R
2209
G
12
UniProt
VAR_001202
R
2228
L
FA8_HUMAN
Disease (HEMA)
---
A
R
2209
L
13
UniProt
VAR_028696
R
2228
P
FA8_HUMAN
Disease (HEMA)
---
A
R
2209
P
14
UniProt
VAR_001203
R
2228
Q
FA8_HUMAN
Disease (HEMA)
---
A
R
2209
Q
15
UniProt
VAR_028697
L
2229
F
FA8_HUMAN
Disease (HEMA)
---
A
L
2210
F
16
UniProt
VAR_001204
V
2242
M
FA8_HUMAN
Polymorphism
---
A
V
2223
M
17
UniProt
VAR_001205
W
2248
C
FA8_HUMAN
Disease (HEMA)
---
A
W
2229
C
18
UniProt
VAR_028698
W
2248
S
FA8_HUMAN
Disease (HEMA)
---
A
W
2229
S
19
UniProt
VAR_028699
V
2251
A
FA8_HUMAN
Disease (HEMA)
---
A
V
2232
A
20
UniProt
VAR_028700
V
2251
E
FA8_HUMAN
Disease (HEMA)
---
A
V
2232
E
21
UniProt
VAR_021356
M
2257
V
FA8_HUMAN
Polymorphism
1800297
A
M
2238
V
22
UniProt
VAR_028701
T
2264
A
FA8_HUMAN
Disease (HEMA)
---
A
T
2245
A
23
UniProt
VAR_001206
Q
2265
R
FA8_HUMAN
Disease (HEMA)
---
A
Q
2246
R
24
UniProt
VAR_028702
F
2279
C
FA8_HUMAN
Disease (HEMA)
---
A
F
2260
C
25
UniProt
VAR_028703
F
2279
I
FA8_HUMAN
Disease (HEMA)
---
A
F
2260
I
26
UniProt
VAR_028704
I
2281
T
FA8_HUMAN
Disease (HEMA)
---
A
I
2262
T
27
UniProt
VAR_065323
D
2286
G
FA8_HUMAN
Disease (HEMA)
---
A
D
2267
G
28
UniProt
VAR_028705
W
2290
L
FA8_HUMAN
Disease (HEMA)
---
A
W
2271
L
29
UniProt
VAR_028706
G
2304
V
FA8_HUMAN
Disease (HEMA)
---
A
G
2285
V
30
UniProt
VAR_015134
D
2307
A
FA8_HUMAN
Disease (HEMA)
---
A
D
2288
A
31
UniProt
VAR_001207
P
2319
L
FA8_HUMAN
Disease (HEMA)
---
A
P
2300
L
32
UniProt
VAR_001208
P
2319
S
FA8_HUMAN
Disease (HEMA)
---
A
P
2300
S
33
UniProt
VAR_001209
R
2323
C
FA8_HUMAN
Disease (HEMA)
---
A
R
2304
C
34
UniProt
VAR_028707
R
2323
G
FA8_HUMAN
Disease (HEMA)
---
A
R
2304
G
35
UniProt
VAR_001210
R
2323
H
FA8_HUMAN
Disease (HEMA)
---
A
R
2304
H
36
UniProt
VAR_028708
R
2323
L
FA8_HUMAN
Disease (HEMA)
---
A
R
2304
L
37
UniProt
VAR_028709
R
2326
G
FA8_HUMAN
Disease (HEMA)
---
A
R
2307
G
38
UniProt
VAR_001211
R
2326
L
FA8_HUMAN
Disease (HEMA)
---
A
R
2307
L
39
UniProt
VAR_028710
R
2326
P
FA8_HUMAN
Disease (HEMA)
---
A
R
2307
P
40
UniProt
VAR_001212
R
2326
Q
FA8_HUMAN
Disease (HEMA)
---
A
R
2307
Q
41
UniProt
VAR_028711
Q
2330
P
FA8_HUMAN
Disease (HEMA)
---
A
Q
2311
P
42
UniProt
VAR_028712
W
2332
R
FA8_HUMAN
Disease (HEMA)
---
A
W
2313
R
43
UniProt
VAR_065324
I
2336
F
FA8_HUMAN
Disease (HEMA)
---
A
I
2317
F
44
UniProt
VAR_028713
R
2339
T
FA8_HUMAN
Disease (HEMA)
---
A
R
2320
T
45
UniProt
VAR_008968
G
2344
C
FA8_HUMAN
Disease (HEMA)
---
A
G
2325
C
46
UniProt
VAR_065325
G
2344
D
FA8_HUMAN
Disease (HEMA)
---
A
G
2325
D
47
UniProt
VAR_028714
G
2344
S
FA8_HUMAN
Disease (HEMA)
---
A
G
2325
S
48
UniProt
VAR_028715
C
2345
S
FA8_HUMAN
Disease (HEMA)
---
A
C
2326
S
49
UniProt
VAR_028716
C
2345
Y
FA8_HUMAN
Disease (HEMA)
---
A
C
2326
Y
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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]
PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: FA58C_3 (A:2174-2326)
2: FA58C_1 (A:2218-2247)
3: FA58C_2 (A:2310-2326)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FA58C_3
PS50022
Coagulation factors 5/8 type C domain (FA58C) profile.
FA8_HUMAN
2040-2188
2193-2345
1
-
A:2174-2326
-
2
FA58C_1
PS01285
Coagulation factors 5/8 type C domain (FA58C) signature 1.
FA8_HUMAN
2080-2107
2237-2266
1
-
A:2218-2247
-
3
FA58C_2
PS01286
Coagulation factors 5/8 type C domain (FA58C) signature 2.
FA8_HUMAN
2172-2188
2329-2345
1
-
A:2310-2326
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3hoba_ (A:)
1b: SCOP_d3hobm_ (M:)
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Protein Domains
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(
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Organisms
(
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(
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Class
:
All beta proteins
(24004)
Fold
:
Galactose-binding domain-like
(314)
Superfamily
:
Galactose-binding domain-like
(314)
Family
:
Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain)
(17)
Protein domain
:
automated matches
(6)
Human (Homo sapiens) [TaxId: 9606]
(5)
1a
d3hoba_
A:
1b
d3hobm_
M:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_3hobA00 (A:2173-2328)
1b: CATH_3hobM00 (M:2173-2328)
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(
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(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
Galactose-binding domain-like
(195)
Human (Homo sapiens)
(39)
1a
3hobA00
A:2173-2328
1b
3hobM00
M:2173-2328
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Pfam Domains
(0, 0)
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all PFAM domains
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