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3HFH
Asym. Unit
Info
Asym.Unit (152 KB)
Biol.Unit 1 (67 KB)
Biol.Unit 2 (74 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF TANDEM FF DOMAINS
Authors
:
M. Lu, J. Yang, Z. Ren, S. Subir, M. T. Bedford, R. H. Jacobson, J. S. Mcmurray, X. Chen
Date
:
11 May 09 (Deposition) - 18 Aug 09 (Release) - 06 Oct 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Helix Bundle, Activator, Alternative Splicing, Coiled Coil, Nucleus, Phosphoprotein, Repressor, Transcription, Transcription Regulation, Transcription Regulator
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Lu, J. Yang, Z. Ren, S. Sabui, A. Espejo, M. T. Bedford, R. H. Jacobson, D. Jeruzalmi, J. S. Mcmurray, X. Chen
Crystal Structure Of The Three Tandem Ff Domains Of The Transcription Elongation Regulator Ca150.
J. Mol. Biol. V. 393 397 2009
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(2, 71)
Info
All Hetero Components
1a: N-DIMETHYL-LYSINE (MLYa)
1aa: N-DIMETHYL-LYSINE (MLYaa)
1ab: N-DIMETHYL-LYSINE (MLYab)
1ac: N-DIMETHYL-LYSINE (MLYac)
1ad: N-DIMETHYL-LYSINE (MLYad)
1ae: N-DIMETHYL-LYSINE (MLYae)
1af: N-DIMETHYL-LYSINE (MLYaf)
1ag: N-DIMETHYL-LYSINE (MLYag)
1ah: N-DIMETHYL-LYSINE (MLYah)
1ai: N-DIMETHYL-LYSINE (MLYai)
1aj: N-DIMETHYL-LYSINE (MLYaj)
1ak: N-DIMETHYL-LYSINE (MLYak)
1al: N-DIMETHYL-LYSINE (MLYal)
1am: N-DIMETHYL-LYSINE (MLYam)
1an: N-DIMETHYL-LYSINE (MLYan)
1ao: N-DIMETHYL-LYSINE (MLYao)
1ap: N-DIMETHYL-LYSINE (MLYap)
1aq: N-DIMETHYL-LYSINE (MLYaq)
1ar: N-DIMETHYL-LYSINE (MLYar)
1as: N-DIMETHYL-LYSINE (MLYas)
1at: N-DIMETHYL-LYSINE (MLYat)
1au: N-DIMETHYL-LYSINE (MLYau)
1av: N-DIMETHYL-LYSINE (MLYav)
1aw: N-DIMETHYL-LYSINE (MLYaw)
1ax: N-DIMETHYL-LYSINE (MLYax)
1ay: N-DIMETHYL-LYSINE (MLYay)
1az: N-DIMETHYL-LYSINE (MLYaz)
1b: N-DIMETHYL-LYSINE (MLYb)
1ba: N-DIMETHYL-LYSINE (MLYba)
1bb: N-DIMETHYL-LYSINE (MLYbb)
1bc: N-DIMETHYL-LYSINE (MLYbc)
1bd: N-DIMETHYL-LYSINE (MLYbd)
1be: N-DIMETHYL-LYSINE (MLYbe)
1c: N-DIMETHYL-LYSINE (MLYc)
1d: N-DIMETHYL-LYSINE (MLYd)
1e: N-DIMETHYL-LYSINE (MLYe)
1f: N-DIMETHYL-LYSINE (MLYf)
1g: N-DIMETHYL-LYSINE (MLYg)
1h: N-DIMETHYL-LYSINE (MLYh)
1i: N-DIMETHYL-LYSINE (MLYi)
1j: N-DIMETHYL-LYSINE (MLYj)
1k: N-DIMETHYL-LYSINE (MLYk)
1l: N-DIMETHYL-LYSINE (MLYl)
1m: N-DIMETHYL-LYSINE (MLYm)
1n: N-DIMETHYL-LYSINE (MLYn)
1o: N-DIMETHYL-LYSINE (MLYo)
1p: N-DIMETHYL-LYSINE (MLYp)
1q: N-DIMETHYL-LYSINE (MLYq)
1r: N-DIMETHYL-LYSINE (MLYr)
1s: N-DIMETHYL-LYSINE (MLYs)
1t: N-DIMETHYL-LYSINE (MLYt)
1u: N-DIMETHYL-LYSINE (MLYu)
1v: N-DIMETHYL-LYSINE (MLYv)
1w: N-DIMETHYL-LYSINE (MLYw)
1x: N-DIMETHYL-LYSINE (MLYx)
1y: N-DIMETHYL-LYSINE (MLYy)
1z: N-DIMETHYL-LYSINE (MLYz)
2a: SELENOMETHIONINE (MSEa)
2b: SELENOMETHIONINE (MSEb)
2c: SELENOMETHIONINE (MSEc)
2d: SELENOMETHIONINE (MSEd)
2e: SELENOMETHIONINE (MSEe)
2f: SELENOMETHIONINE (MSEf)
2g: SELENOMETHIONINE (MSEg)
2h: SELENOMETHIONINE (MSEh)
2i: SELENOMETHIONINE (MSEi)
2j: SELENOMETHIONINE (MSEj)
2k: SELENOMETHIONINE (MSEk)
2l: SELENOMETHIONINE (MSEl)
2m: SELENOMETHIONINE (MSEm)
2n: SELENOMETHIONINE (MSEn)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
MLY
57
Mod. Amino Acid
N-DIMETHYL-LYSINE
2
MSE
14
Mod. Amino Acid
SELENOMETHIONINE
[
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]
Sites
(0, 0)
Info
All Sites
View:
Select:
Label:
Sorry, no Info available
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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]
PROSITE Patterns/Profiles
(1, 6)
Info
All PROSITE Patterns/Profiles
1: FF (A:661-712,B:661-712|A:725-779,B:72...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FF
PS51676
FF domain profile.
TCRG1_HUMAN
659-712
725-779
791-846
896-952
954-1010
1012-1077
6
A:661-712
B:661-712
A:725-779
B:725-779
A:791-845
B:791-845
-
-
-
[
close PROSITE info
]
Exons
(6, 12)
Info
All Exons
Exon 1.13a (A:657-660 | B:656-660)
Exon 1.14c (A:661-674 | B:661-674)
Exon 1.15 (A:675-704 | B:675-704)
Exon 1.16c (A:705-736 | B:705-744)
Exon 1.17 (A:758-794 | B:744-794)
Exon 1.19b (A:795-845 | B:795-845)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.12/1.13a
2: Boundary 1.13a/1.14c
3: Boundary 1.14c/1.15
4: Boundary 1.15/1.16c
5: Boundary 1.16c/1.17
6: Boundary 1.17/1.19b
7: Boundary 1.19b/1.20a
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000296702
1b
ENSE00001958061
chr5:
145826875-145826971
97
TCRG1_HUMAN
1-20
20
0
-
-
1.2
ENST00000296702
2
ENSE00000875393
chr5:
145834619-145834844
226
TCRG1_HUMAN
20-95
76
0
-
-
1.3
ENST00000296702
3
ENSE00000875394
chr5:
145836746-145836898
153
TCRG1_HUMAN
96-146
51
0
-
-
1.4a
ENST00000296702
4a
ENSE00001026741
chr5:
145838447-145838900
454
TCRG1_HUMAN
147-298
152
0
-
-
1.6
ENST00000296702
6
ENSE00000875396
chr5:
145843114-145843356
243
TCRG1_HUMAN
298-379
82
0
-
-
1.7
ENST00000296702
7
ENSE00000766804
chr5:
145847904-145847966
63
TCRG1_HUMAN
379-400
22
0
-
-
1.8a
ENST00000296702
8a
ENSE00000766805
chr5:
145849107-145849307
201
TCRG1_HUMAN
400-467
68
0
-
-
1.9a
ENST00000296702
9a
ENSE00001126961
chr5:
145850199-145850311
113
TCRG1_HUMAN
467-504
38
0
-
-
1.10
ENST00000296702
10
ENSE00001126952
chr5:
145851051-145851139
89
TCRG1_HUMAN
505-534
30
0
-
-
1.11b
ENST00000296702
11b
ENSE00001126945
chr5:
145858056-145858216
161
TCRG1_HUMAN
534-588
55
0
-
-
1.12
ENST00000296702
12
ENSE00001126936
chr5:
145859418-145859474
57
TCRG1_HUMAN
588-607
20
0
-
-
1.13a
ENST00000296702
13a
ENSE00001126927
chr5:
145859591-145859657
67
TCRG1_HUMAN
607-629
23
2
A:657-660
B:656-660
4
5
1.14c
ENST00000296702
14c
ENSE00001126919
chr5:
145862155-145862290
136
TCRG1_HUMAN
629-674
46
2
A:661-674
B:661-674
14
14
1.15
ENST00000296702
15
ENSE00001126912
chr5:
145863103-145863192
90
TCRG1_HUMAN
675-704
30
2
A:675-704
B:675-704
30
30
1.16c
ENST00000296702
16c
ENSE00000766812
chr5:
145872483-145872601
119
TCRG1_HUMAN
705-744
40
2
A:705-736
B:705-744
32
40
1.17
ENST00000296702
17
ENSE00000766813
chr5:
145878099-145878249
151
TCRG1_HUMAN
744-794
51
2
A:758-794
B:744-794
37
51
1.19b
ENST00000296702
19b
ENSE00000766816
chr5:
145882938-145883102
165
TCRG1_HUMAN
795-849
55
2
A:795-845
B:795-845
51
51
1.20a
ENST00000296702
20a
ENSE00000766817
chr5:
145883387-145883569
183
TCRG1_HUMAN
850-910
61
0
-
-
1.23b
ENST00000296702
23b
ENSE00000766818
chr5:
145886591-145886770
180
TCRG1_HUMAN
911-970
60
0
-
-
1.24c
ENST00000296702
24c
ENSE00000766819
chr5:
145887436-145887519
84
TCRG1_HUMAN
971-998
28
0
-
-
1.25
ENST00000296702
25
ENSE00001082938
chr5:
145888708-145888808
101
TCRG1_HUMAN
999-1032
34
0
-
-
1.27d
ENST00000296702
27d
ENSE00001918127
chr5:
145890004-145891524
1521
TCRG1_HUMAN
1032-1098
67
0
-
-
[
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]
SCOP Domains
(0, 0)
Info
All SCOP Domains
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Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
[
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]
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