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3HFB
Asym. Unit
Info
Asym.Unit (58 KB)
Biol.Unit 1 (52 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN TRYOPTOPHAN HYDROXYLASE TYPE 1 WITH LP-534193
Authors
:
L. W. Tari, R. V. Swanson, M. J. Hunter
Date
:
11 May 09 (Deposition) - 21 Apr 10 (Release) - 28 Mar 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.92
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Tryptophan Hydroxylase Type 1, Iron, Metal-Binding, Monooxygenase, Oxidoreductase, Phosphoprotein, Serotonin Biosynthesis
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. Cianchetta, T. Stouch, W. Yu, Z. C. Shi, L. W. Tari, R. V. Swanson, M. J. Hunter, I. D. Hoffman, Q. Liu
Mechanism Of Inhibition Of Novel Tryptophan Hydroxylase Inhibitors Revealed By Co-Crystal Structures And Kinetic Analysis.
Curr Chem Genomics V. 4 19 2010
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: FE (III) ION (FEa)
2a: 4-(5-{[(2'-METHYLBIPHENYL-2-YL)MET... (ML4a)
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Label:
No.
Name
Count
Type
Full Name
1
FE
1
Ligand/Ion
FE (III) ION
2
ML4
1
Ligand/Ion
4-(5-{[(2'-METHYLBIPHENYL-2-YL)METHYL]AMINO}PYRAZIN-2-YL)-L-PHENYLALANINE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:272 , HIS A:277 , GLU A:317 , HOH A:412 , HOH A:413 , HOH A:414
BINDING SITE FOR RESIDUE FE A 400
2
AC2
SOFTWARE
PRO A:238 , ARG A:257 , TYR A:264 , THR A:265 , PRO A:266 , HIS A:272 , GLN A:306 , ALA A:309 , PHE A:313 , GLU A:317 , SER A:336 , SER A:337 , CYS A:364 , HOH A:576 , HOH A:578 , HOH A:590 , HOH A:614 , HOH A:647 , HOH A:680
BINDING SITE FOR RESIDUE ML4 A 401
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: BH4_AAA_HYDROXYL_1 (A:268-279)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BH4_AAA_HYDROXYL_1
PS00367
Biopterin-dependent aromatic amino acid hydroxylases signature.
TPH1_HUMAN
268-279
1
A:268-279
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Exons
(8, 8)
Info
All Exons
Exon 1.4 (A:104-121)
Exon 1.5b (A:138-157)
Exon 1.6 (A:157-223)
Exon 1.7 (A:223-268)
Exon 1.8 (A:268-310)
Exon 1.9 (A:311-342)
Exon 1.10b (A:343-387)
Exon 1.11d (A:387-393)
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All Exon Boundaries
1: Boundary 1.3/1.4
2: Boundary 1.4/1.5b
3: Boundary 1.5b/1.6
4: Boundary 1.6/1.7
5: Boundary 1.7/1.8
6: Boundary 1.8/1.9
7: Boundary 1.9/1.10b
8: Boundary 1.10b/1.11d
9: Boundary 1.11d/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2a
ENST00000250018
2a
ENSE00002158804
chr11:
18062872-18062193
680
TPH1_HUMAN
1-39
39
0
-
-
1.3
ENST00000250018
3
ENSE00000886552
chr11:
18057689-18057506
184
TPH1_HUMAN
40-101
62
0
-
-
1.4
ENST00000250018
4
ENSE00000886551
chr11:
18054921-18054821
101
TPH1_HUMAN
101-134
34
1
A:104-121
18
1.5b
ENST00000250018
5b
ENSE00000886550
chr11:
18051126-18051059
68
TPH1_HUMAN
135-157
23
1
A:138-157
20
1.6
ENST00000250018
6
ENSE00000886549
chr11:
18050908-18050712
197
TPH1_HUMAN
157-223
67
1
A:157-223
67
1.7
ENST00000250018
7
ENSE00001803012
chr11:
18048172-18048037
136
TPH1_HUMAN
223-268
46
1
A:223-268
46
1.8
ENST00000250018
8
ENSE00001617695
chr11:
18047248-18047122
127
TPH1_HUMAN
268-310
43
1
A:268-310
43
1.9
ENST00000250018
9
ENSE00001763303
chr11:
18045530-18045435
96
TPH1_HUMAN
311-342
32
1
A:311-342
32
1.10b
ENST00000250018
10b
ENSE00001761007
chr11:
18044478-18044345
134
TPH1_HUMAN
343-387
45
1
A:343-387
45
1.11d
ENST00000250018
11d
ENSE00002161624
chr11:
18042712-18039111
3602
TPH1_HUMAN
387-444
58
1
A:387-393
7
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3hfba_ (A:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
(36)
Superfamily
:
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
(36)
Family
:
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
(36)
Protein domain
:
Tryptophan hydroxylase
(4)
Human (Homo sapiens) [TaxId: 9606]
(4)
1a
d3hfba_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_3hfbA00 (A:104-393)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Phenylalanine Hydroxylase
(29)
Homologous Superfamily
:
Phenylalanine Hydroxylase
(29)
Human (Homo sapiens)
(19)
1a
3hfbA00
A:104-393
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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