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3HEA
Asym. Unit
Info
Asym.Unit (291 KB)
Biol.Unit 1 (145 KB)
Biol.Unit 2 (144 KB)
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(1)
Title
:
THE L29P/L124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
Authors
:
R. J. Kazlauskas, J. D. Schrag, J. D. Cheeseman, K. L. Morley
Date
:
08 May 09 (Deposition) - 23 Mar 10 (Release) - 23 Mar 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C (1x)
Biol. Unit 2: D,E,F (1x)
Keywords
:
Alpha/Beta Hydrolase, Esterase, Covalent Adduct, Tetrahedral Intermediate, Hydrolase, Oxidoreductase, Peroxidase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. T. Yin De, P. Bernhardt, K. L. Morley, Y. Jiang, J. D. Cheeseman, V. Purpero, J. D. Schrag, R. J. Kazlauskas
Switching Catalysis From Hydrolysis To Perhydrolysis In Pseudomonas Fluorescens Esterase.
Biochemistry V. 49 1931 2010
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(3, 44)
Info
All Hetero Components
1a: ETHYL ACETATE (EEEa)
1b: ETHYL ACETATE (EEEb)
1c: ETHYL ACETATE (EEEc)
1d: ETHYL ACETATE (EEEd)
1e: ETHYL ACETATE (EEEe)
1f: ETHYL ACETATE (EEEf)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
2i: GLYCEROL (GOLi)
2j: GLYCEROL (GOLj)
2k: GLYCEROL (GOLk)
2l: GLYCEROL (GOLl)
2m: GLYCEROL (GOLm)
2n: GLYCEROL (GOLn)
2o: GLYCEROL (GOLo)
2p: GLYCEROL (GOLp)
2q: GLYCEROL (GOLq)
2r: GLYCEROL (GOLr)
2s: GLYCEROL (GOLs)
2t: GLYCEROL (GOLt)
2u: GLYCEROL (GOLu)
2v: GLYCEROL (GOLv)
2w: GLYCEROL (GOLw)
2x: GLYCEROL (GOLx)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
3g: SULFATE ION (SO4g)
3h: SULFATE ION (SO4h)
3i: SULFATE ION (SO4i)
3j: SULFATE ION (SO4j)
3k: SULFATE ION (SO4k)
3l: SULFATE ION (SO4l)
3m: SULFATE ION (SO4m)
3n: SULFATE ION (SO4n)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EEE
6
Ligand/Ion
ETHYL ACETATE
2
GOL
24
Ligand/Ion
GLYCEROL
3
SO4
14
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(44, 44)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:1 , TYR A:12 , ASP A:15 , HOH A:377 , GLN C:62
BINDING SITE FOR RESIDUE GOL A 272
02
AC2
SOFTWARE
LEU D:137 , ALA D:141 , LYS D:144 , THR D:196 , GLU D:200
BINDING SITE FOR RESIDUE GOL D 272
03
AC3
SOFTWARE
ASP B:61 , GLN B:62 , SER C:1 , TYR C:12 , LYS C:14 , ASP C:15 , HOH C:337
BINDING SITE FOR RESIDUE GOL C 272
04
AC4
SOFTWARE
SER D:1 , TYR D:12 , LYS D:14 , ASP D:15 , HOH D:343 , ASP E:61 , GLN E:62
BINDING SITE FOR RESIDUE GOL D 273
05
AC5
SOFTWARE
SER E:1 , TYR E:12 , ASP E:15 , HOH E:823 , ASP F:61 , GLN F:62
BINDING SITE FOR RESIDUE GOL E 272
06
AC6
SOFTWARE
ASP D:61 , GLN D:62 , SER F:1 , TYR F:12 , LYS F:14 , ASP F:15 , HOH F:511
BINDING SITE FOR RESIDUE GOL F 272
07
AC7
SOFTWARE
LEU A:137 , ALA A:141 , LYS A:144 , THR A:196 , GLU A:200
BINDING SITE FOR RESIDUE GOL A 273
08
AC8
SOFTWARE
LEU B:137 , ALA B:141 , LYS B:144 , THR B:196 , GLU B:200 , HOH B:713
BINDING SITE FOR RESIDUE GOL B 272
09
AC9
SOFTWARE
LEU C:137 , LYS C:144 , THR C:196 , GLU C:200
BINDING SITE FOR RESIDUE GOL C 273
10
BC1
SOFTWARE
LEU E:137 , ALA E:141 , LYS E:144 , THR E:196 , GLU E:200 , HOH E:779
BINDING SITE FOR RESIDUE GOL E 273
11
BC2
SOFTWARE
LEU F:137 , ALA F:141 , LYS F:144 , GLU F:200
BINDING SITE FOR RESIDUE GOL F 273
12
BC3
SOFTWARE
ASP A:61 , GLN A:62 , SER B:1 , TYR B:12 , LYS B:14 , ASP B:15 , HOH B:364
BINDING SITE FOR RESIDUE GOL B 273
13
BC4
SOFTWARE
LEU D:30 , TYR D:163 , VAL D:175 , GLN D:178 , THR D:179 , ILE D:182 , HOH D:299 , HOH D:494 , HOH D:975
BINDING SITE FOR RESIDUE GOL D 274
14
BC5
SOFTWARE
TYR E:163 , VAL E:175 , GLN E:178 , THR E:179 , ILE E:182 , HOH E:298 , HOH E:615
BINDING SITE FOR RESIDUE GOL E 274
15
BC6
SOFTWARE
TYR A:163 , VAL A:175 , GLN A:178 , THR A:179 , ILE A:182 , HOH A:310 , HOH A:587
BINDING SITE FOR RESIDUE GOL A 274
16
BC7
SOFTWARE
LEU B:30 , TYR B:163 , VAL B:175 , GLN B:178 , THR B:179 , ILE B:182 , HOH B:294 , HOH B:348 , HOH B:914
BINDING SITE FOR RESIDUE GOL B 274
17
BC8
SOFTWARE
LEU C:30 , TYR C:163 , VAL C:175 , GLN C:178 , THR C:179 , ILE C:182 , HOH C:301 , HOH C:529 , HOH C:552
BINDING SITE FOR RESIDUE GOL C 274
18
BC9
SOFTWARE
TYR F:163 , VAL F:175 , GLN F:178 , THR F:179 , ILE F:182 , HOH F:293 , HOH F:521
BINDING SITE FOR RESIDUE GOL F 274
19
CC1
SOFTWARE
LYS E:6 , ASP E:74 , GLN E:78 , GLU E:81 , HIS E:107 , HOH E:281 , HOH E:814
BINDING SITE FOR RESIDUE GOL E 275
20
CC2
SOFTWARE
GLN C:223 , ILE C:224
BINDING SITE FOR RESIDUE GOL C 275
21
CC3
SOFTWARE
GLN B:223 , ILE B:224
BINDING SITE FOR RESIDUE GOL B 275
22
CC4
SOFTWARE
VAL F:245 , LYS F:247 , GLN F:260 , HOH F:438
BINDING SITE FOR RESIDUE GOL F 275
23
CC5
SOFTWARE
PHE F:143 , GLN F:223 , ILE F:224 , PRO F:226
BINDING SITE FOR RESIDUE GOL F 276
24
CC6
SOFTWARE
GLN E:223 , ILE E:224
BINDING SITE FOR RESIDUE GOL E 276
25
CC7
SOFTWARE
VAL E:245 , TYR E:246 , LYS E:247 , GLN E:260 , HOH E:903
BINDING SITE FOR RESIDUE SO4 E 277
26
CC8
SOFTWARE
ASN A:166 , SER C:18 , GLY C:19 , HOH C:1039
BINDING SITE FOR RESIDUE SO4 A 275
27
CC9
SOFTWARE
VAL C:245 , TYR C:246 , LYS C:247 , GLN C:260 , HOH C:396
BINDING SITE FOR RESIDUE SO4 C 276
28
DC1
SOFTWARE
ARG A:106
BINDING SITE FOR RESIDUE SO4 A 276
29
DC2
SOFTWARE
ASP B:70 , ARG B:106 , HOH B:806
BINDING SITE FOR RESIDUE SO4 B 276
30
DC3
SOFTWARE
ARG C:106
BINDING SITE FOR RESIDUE SO4 C 277
31
DC4
SOFTWARE
VAL A:245 , TYR A:246 , LYS A:247 , GLN A:260 , HOH A:699
BINDING SITE FOR RESIDUE SO4 A 277
32
DC5
SOFTWARE
ASP E:70 , ARG E:106
BINDING SITE FOR RESIDUE SO4 E 278
33
DC6
SOFTWARE
ARG D:106
BINDING SITE FOR RESIDUE SO4 D 275
34
DC7
SOFTWARE
PHE A:3 , VAL A:4 , HIS A:82 , HOH A:1004 , LYS B:247 , ASP B:248
BINDING SITE FOR RESIDUE SO4 A 278
35
DC8
SOFTWARE
VAL D:245 , TYR D:246 , LYS D:247 , GLN D:260 , HOH D:1031
BINDING SITE FOR RESIDUE SO4 D 276
36
DC9
SOFTWARE
VAL B:245 , TYR B:246 , LYS B:247 , GLN B:260 , HOH B:822
BINDING SITE FOR RESIDUE SO4 B 277
37
EC1
SOFTWARE
ARG F:106 , HOH F:920
BINDING SITE FOR RESIDUE SO4 F 277
38
EC2
SOFTWARE
HIS B:107 , GLN C:173 , HOH C:306 , HOH C:780
BINDING SITE FOR RESIDUE SO4 C 278
39
EC3
SOFTWARE
GLY A:27 , TRP A:28 , PHE A:93 , SER A:94 , MET A:95 , ILE A:224 , HIS A:251
BINDING SITE FOR RESIDUE EEE A 300
40
EC4
SOFTWARE
GLY B:27 , TRP B:28 , PHE B:93 , SER B:94 , MET B:95 , ILE B:224 , HIS B:251
BINDING SITE FOR RESIDUE EEE B 300
41
EC5
SOFTWARE
GLY C:27 , TRP C:28 , PHE C:93 , SER C:94 , MET C:95 , ILE C:224 , HIS C:251
BINDING SITE FOR RESIDUE EEE C 300
42
EC6
SOFTWARE
GLY D:27 , TRP D:28 , PHE D:93 , SER D:94 , MET D:95 , ILE D:224 , HIS D:251 , HOH D:645
BINDING SITE FOR RESIDUE EEE D 300
43
EC7
SOFTWARE
GLY E:27 , TRP E:28 , PHE E:93 , SER E:94 , MET E:95 , ILE E:224 , HIS E:251
BINDING SITE FOR RESIDUE EEE E 300
44
EC8
SOFTWARE
GLY F:27 , TRP F:28 , PHE F:93 , SER F:94 , MET F:95 , PHE F:198 , ILE F:224 , HIS F:251
BINDING SITE FOR RESIDUE EEE F 300
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
View:
Select:
Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d3heaa_ (A:)
1b: SCOP_d3heae_ (E:)
1c: SCOP_d3heaf_ (F:)
1d: SCOP_d3heab_ (B:)
1e: SCOP_d3heac_ (C:)
1f: SCOP_d3head_ (D:)
View:
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
alpha/beta-Hydrolases
(971)
Superfamily
:
alpha/beta-Hydrolases
(971)
Family
:
Haloperoxidase
(17)
Protein domain
:
automated matches
(7)
Pseudomonas fluorescens [TaxId: 294]
(5)
1a
d3heaa_
A:
1b
d3heae_
E:
1c
d3heaf_
F:
1d
d3heab_
B:
1e
d3heac_
C:
1f
d3head_
D:
[
close SCOP info
]
CATH Domains
(1, 6)
Info
all CATH domains
1a: CATH_3heaA00 (A:1-271)
1b: CATH_3heaB00 (B:1-271)
1c: CATH_3heaC00 (C:1-271)
1d: CATH_3heaD00 (D:1-271)
1e: CATH_3heaE00 (E:1-271)
1f: CATH_3heaF00 (F:1-271)
View:
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Architectures
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(
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Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.1820, no name defined]
(692)
Pseudomonas fluorescens. Organism_taxid: 294.
(4)
1a
3heaA00
A:1-271
1b
3heaB00
B:1-271
1c
3heaC00
C:1-271
1d
3heaD00
D:1-271
1e
3heaE00
E:1-271
1f
3heaF00
F:1-271
[
close CATH info
]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Asym.Unit (291 KB)
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