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3HBZ
Asym. Unit
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Asym.Unit (74 KB)
Biol.Unit 1 (66 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A PUTATIVE GLYCOSIDE HYDROLASE (BT_2081) FROM BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 2.05 A RESOLUTION
Authors
:
Joint Center For Structural Genomics (Jcsg)
Date
:
05 May 09 (Deposition) - 26 May 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.05
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Ca-Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. P. Yeh, P. Abdubek, T. Astakhova, H. L. Axelrod, C. Bakolitsa, X. Cai D. Carlton, C. Chen, H. J. Chiu, M. Chiu, T. Clayton, D. Das, M. C. Deller L. Duan, K. Ellrott, C. L. Farr, J. Feuerhelm, J. C. Grant, A. Grzechnik G. W. Han, L. Jaroszewski, K. K. Jin, H. E. Klock, M. W. Knuth, P. Kozbial S. S. Krishna, A. Kumar, W. W. Lam, D. Marciano, D. Mcmullan, M. D. Miller, A. T. Morse, E. Nigoghossian, A. Nopakun, L. Okach, C. Puckett, R. Reyes, H. J. Tien, C. B. Trame, H. Van Den Bedem, D. Weekes, T. Wooten, Q. Xu, K. O. Hodgson, J. Wooley, M. A. Elsliger, A. M. Deacon, A. Godzik, S. A. Lesley, I. A. Wilson
Structure Of Bacteroides Thetaiotaomicron Bt2081 At 2. 05 A Resolution: The First Structural Representativ Of A New Protein Family That May Play A Role In Carbohydrat Metabolism.
Acta Crystallogr. , Sect. F V. 66 1287 2010
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Hetero Components
(7, 35)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
3a: CACODYLATE ION (CACa)
3b: CACODYLATE ION (CACb)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
4a: SELENOMETHIONINE (MSEa)
4b: SELENOMETHIONINE (MSEb)
4c: SELENOMETHIONINE (MSEc)
4d: SELENOMETHIONINE (MSEd)
4e: SELENOMETHIONINE (MSEe)
4f: SELENOMETHIONINE (MSEf)
4g: SELENOMETHIONINE (MSEg)
4h: SELENOMETHIONINE (MSEh)
5a: SODIUM ION (NAa)
5b: SODIUM ION (NAb)
6a: HEXAETHYLENE GLYCOL (P6Ga)
6b: HEXAETHYLENE GLYCOL (P6Gb)
6c: HEXAETHYLENE GLYCOL (P6Gc)
6d: HEXAETHYLENE GLYCOL (P6Gd)
6e: HEXAETHYLENE GLYCOL (P6Ge)
6f: HEXAETHYLENE GLYCOL (P6Gf)
6g: HEXAETHYLENE GLYCOL (P6Gg)
7a: DI(HYDROXYETHYL)ETHER (PEGa)
7b: DI(HYDROXYETHYL)ETHER (PEGb)
7c: DI(HYDROXYETHYL)ETHER (PEGc)
7d: DI(HYDROXYETHYL)ETHER (PEGd)
7e: DI(HYDROXYETHYL)ETHER (PEGe)
7f: DI(HYDROXYETHYL)ETHER (PEGf)
7g: DI(HYDROXYETHYL)ETHER (PEGg)
7h: DI(HYDROXYETHYL)ETHER (PEGh)
7i: DI(HYDROXYETHYL)ETHER (PEGi)
7j: DI(HYDROXYETHYL)ETHER (PEGj)
7k: DI(HYDROXYETHYL)ETHER (PEGk)
7l: DI(HYDROXYETHYL)ETHER (PEGl)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
CA
2
Ligand/Ion
CALCIUM ION
3
CAC
2
Ligand/Ion
CACODYLATE ION
4
MSE
8
Mod. Amino Acid
SELENOMETHIONINE
5
NA
2
Ligand/Ion
SODIUM ION
6
P6G
7
Ligand/Ion
HEXAETHYLENE GLYCOL
7
PEG
12
Ligand/Ion
DI(HYDROXYETHYL)ETHER
[
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]
Sites
(27, 27)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:120 , GLU A:122 , THR A:174 , LYS A:176 , ASP A:351 , HOH A:371
BINDING SITE FOR RESIDUE CA A 1
02
AC2
SOFTWARE
CAC A:5 , GLU A:28 , LYS A:103 , ASP A:162 , HOH A:485 , HOH A:586
BINDING SITE FOR RESIDUE CA A 2
03
AC3
SOFTWARE
ILE A:118 , GLU A:135 , HOH A:395 , HOH A:454 , HOH A:555 , HOH A:590
BINDING SITE FOR RESIDUE NA A 3
04
AC4
SOFTWARE
ASN A:26 , GLU A:28 , ASP A:30 , HOH A:436 , HOH A:528
BINDING SITE FOR RESIDUE NA A 4
05
AC5
SOFTWARE
CA A:2 , PHE A:101 , TRP A:102 , LYS A:103 , ASP A:162 , HOH A:569
BINDING SITE FOR RESIDUE CAC A 5
06
AC6
SOFTWARE
THR A:48 , ASN A:49 , ASN A:50 , GLN A:128 , ILE A:132 , HOH A:493 , HOH A:508
BINDING SITE FOR RESIDUE CAC A 6
07
AC7
SOFTWARE
GLU A:114 , LEU A:115 , PRO A:224 , PHE A:225 , ARG A:226 , HIS A:227
BINDING SITE FOR RESIDUE ACT A 7
08
AC8
SOFTWARE
MSE A:41 , P6G A:368
BINDING SITE FOR RESIDUE ACT A 8
09
AC9
SOFTWARE
PHE A:101 , THR A:297 , ASP A:298
BINDING SITE FOR RESIDUE PEG A 9
10
BC1
SOFTWARE
PEG A:15
BINDING SITE FOR RESIDUE PEG A 10
11
BC2
SOFTWARE
PEG A:12 , TYR A:314
BINDING SITE FOR RESIDUE PEG A 11
12
BC3
SOFTWARE
PEG A:11 , GLY A:312 , TYR A:314 , HOH A:558
BINDING SITE FOR RESIDUE PEG A 12
13
BC4
SOFTWARE
PEG A:19 , PHE A:280 , SER A:282 , LYS A:313 , P6G A:367 , HOH A:566
BINDING SITE FOR RESIDUE PEG A 13
14
BC5
SOFTWARE
PEG A:16 , HIS A:339
BINDING SITE FOR RESIDUE PEG A 14
15
BC6
SOFTWARE
PEG A:10 , PEG A:18 , MSE A:192
BINDING SITE FOR RESIDUE PEG A 15
16
BC7
SOFTWARE
PEG A:14 , ARG A:290 , LEU A:335 , GLU A:336 , ASP A:338 , P6G A:367
BINDING SITE FOR RESIDUE PEG A 16
17
BC8
SOFTWARE
GLU A:266 , ASN A:284
BINDING SITE FOR RESIDUE PEG A 17
18
BC9
SOFTWARE
PEG A:15 , MSE A:192 , GLY A:193 , MSE A:212 , SER A:213 , HOH A:561
BINDING SITE FOR RESIDUE PEG A 18
19
CC1
SOFTWARE
PEG A:13 , ARG A:290 , P6G A:367
BINDING SITE FOR RESIDUE PEG A 19
20
CC2
SOFTWARE
GLU A:23 , GLU A:354 , P6G A:365 , P6G A:366
BINDING SITE FOR RESIDUE PEG A 20
21
CC3
SOFTWARE
SER A:44 , PRO A:45 , SER A:205 , LYS A:220 , HOH A:405 , HOH A:422
BINDING SITE FOR RESIDUE P6G A 362
22
CC4
SOFTWARE
PHE A:188 , HOH A:415
BINDING SITE FOR RESIDUE P6G A 363
23
CC5
SOFTWARE
LEU A:125 , GLY A:127 , GLN A:128 , TYR A:131 , THR A:160 , HOH A:560 , HOH A:605
BINDING SITE FOR RESIDUE P6G A 364
24
CC6
SOFTWARE
PEG A:20 , ALA A:24 , TYR A:231 , TYR A:302 , LYS A:304
BINDING SITE FOR RESIDUE P6G A 365
25
CC7
SOFTWARE
PEG A:20 , ILE A:118 , ASN A:120 , GLU A:122 , HOH A:596
BINDING SITE FOR RESIDUE P6G A 366
26
CC8
SOFTWARE
PEG A:13 , PEG A:16 , PEG A:19 , SER A:33 , ARG A:290 , HIS A:308
BINDING SITE FOR RESIDUE P6G A 367
27
CC9
SOFTWARE
ACT A:8 , THR A:267 , ALA A:322 , LYS A:324
BINDING SITE FOR RESIDUE P6G A 368
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (74 KB)
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