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3HAN
Asym. Unit
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Asym.Unit (41 KB)
Biol.Unit 1 (37 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF BACTERIORHODOPSIN MUTANT V49A CRYSTALLIZED FROM BICELLES
Authors
:
N. H. Joh, D. Yang, J. U. Bowie
Date
:
02 May 09 (Deposition) - 22 Sep 09 (Release) - 22 Sep 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.75
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Bacteriorhodopsin, Packing Force, Van Der Waals, Evolutionary Constraint, Membrane Protein, Integral Membrane Protein, Helical Membrane Protein, Proton Transport, Cell Membrane, Chromophore, Hydrogen Ion Transport, Ion Transport, Membrane, Photoreceptor Protein, Pyrrolidone Carboxylic Acid, Receptor, Retinal Protein, Sensory Transduction, Transmembrane, Transport, Transport Protein
(Keyword Search:
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Reference
:
N. H. Joh, A. Oberai, D. Yang, J. P. Whitelegge, J. U. Bowie
Similar Energetic Contributions Of Packing In The Core Of Membrane And Water-Soluble Proteins.
J. Am. Chem. Soc. V. 131 10846 2009
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
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1a: RETINAL (RETa)
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No.
Name
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Type
Full Name
1
RET
1
Ligand/Ion
RETINAL
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Sites
(1, 1)
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1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TRP A:86 , THR A:90 , LEU A:93 , MET A:118 , TRP A:138 , SER A:141 , THR A:142 , TRP A:182 , TYR A:185 , PRO A:186 , TRP A:189 , LYS A:216
BINDING SITE FOR RESIDUE RET A 301
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PROSITE Patterns/Profiles
(2, 2)
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1: BACTERIAL_OPSIN_1 (A:82-94)
2: BACTERIAL_OPSIN_RET (A:208-219)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BACTERIAL_OPSIN_1
PS00950
Bacterial rhodopsins signature 1.
BACR_HALSA
95-107
1
A:82-94
2
BACTERIAL_OPSIN_RET
PS00327
Bacterial rhodopsins retinal binding site.
BACR_HALSA
221-232
1
A:208-219
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
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1a: SCOP_d3hana_ (A:)
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Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
Family A G protein-coupled receptor-like
(138)
Superfamily
:
Family A G protein-coupled receptor-like
(138)
Family
:
Bacteriorhodopsin-like
(107)
Protein domain
:
automated matches
(33)
Halobacterium salinarum [TaxId: 2242]
(21)
1a
d3hana_
A:
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CATH Domains
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1a: CATH_3hanA00 (A:6-230)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Rhopdopsin 7-helix transmembrane proteins
(128)
Homologous Superfamily
:
Rhopdopsin 7-helix transmembrane proteins
(128)
Halobacterium halobium (Halobacterium salinarum)
(6)
1a
3hanA00
A:6-230
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Chain A
Asymmetric Unit 1
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