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3HA8
Biol. Unit 1
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Asym.Unit (63 KB)
Biol.Unit 1 (58 KB)
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(1)
Title
:
THE COMPLEX STRUCTURE OF THE MAP KINASE P38/COMPOUND 14B
Authors
:
B. Zhao, M. A. Clark
Date
:
01 May 09 (Deposition) - 04 Aug 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.48
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Transferase, Inhibitor, Map Kinase, Serine/ Threonine-Protein Kinase, P38, Atp-Binding, Kinase, Nucleotide-Binding, Nucleus, Phosphoprotein, Serine/Threonine-Protein Kinase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. A. Clark, R. A. Acharya, C. C. Arico-Muendel, S. L. Belyanskaya, D. R. Benjamin, N. R. Carlson, P. A. Centrella, C. H. Chiu, S. P. Creaser J. W. Cuozzo, C. P. Davie, Y. Ding, G. J. Franklin, K. D. Franzen, M. L. Gefter, S. P. Hale, N. J. Hansen, D. I. Israel, J. Jiang, M. J. Kavarana, M. S. Kelley, C. S. Kollmann, F. Li, K. Lind, S. Mataruse P. F. Medeiros, J. A. Messer, P. Myers, H. O'Keefe, M. C. Oliff, C. E. Rise, A. L. Satz, S. R. Skinner, J. L. Svendsen, L. Tang, K. Van Vloten, R. W. Wagner, G. Yao, B. Zhao, B. A. Morgan
Design, Synthesis And Selection Of Dna-Encoded Small-Molecule Libraries.
Nat. Chem. Biol. V. 5 647 2009
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: N~2~-{4-[6-(3,4-DIHYDROQUINOLIN-1(... (5JZa)
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No.
Name
Count
Type
Full Name
1
5JZ
1
Ligand/Ion
N~2~-{4-[6-(3,4-DIHYDROQUINOLIN-1(2H)-YLCARBONYL)-1H-BENZIMIDAZOL-1-YL]-6-ETHOXY-1,3,5-TRIAZIN-2-YL}-3-(2,2-DIMETHYL-4H-1,3-BENZODIOXIN-6-YL)-N-METHYL-L-ALANINAMIDE
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
VAL A:30 , GLY A:31 , ALA A:51 , LYS A:53 , LEU A:104 , THR A:106 , LEU A:108 , MET A:109 , GLY A:110 , ALA A:111 , ASP A:112 , SER A:154 , ALA A:157 , LEU A:167 , HOH A:376 , HOH A:388 , HOH A:406
BINDING SITE FOR RESIDUE 5JZ A 361
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_042270 (A51V, chain A, )
2: VAR_042271 (P322R, chain A, )
3: VAR_042272 (D343G, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_042270
A
51
V
MK14_HUMAN
Unclassified
---
A
A
51
V
2
UniProt
VAR_042271
P
322
R
MK14_HUMAN
Unclassified
---
A
P
322
R
3
UniProt
VAR_042272
D
343
G
MK14_HUMAN
Polymorphism
45496794
A
D
343
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:30-54)
2: MAPK (A:59-162)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
MK14_HUMAN
30-54
1
A:30-54
2
MAPK
PS01351
MAP kinase signature.
MK14_HUMAN
59-162
1
A:59-162
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3ha8a_ (A:)
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Protein Domains
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(
)
Organisms
(
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(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
MAP kinase p38
(184)
Human (Homo sapiens) [TaxId: 9606]
(162)
1a
d3ha8a_
A:
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_3ha8A01 (A:5-110,A:320-349)
2a: CATH_3ha8A02 (A:111-319)
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Organisms
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(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
3ha8A01
A:5-110,A:320-349
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
2a
3ha8A02
A:111-319
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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Asym.Unit (63 KB)
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