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3H4X
Asym. Unit
Info
Asym.Unit (120 KB)
Biol.Unit 1 (114 KB)
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(1)
Title
:
STRUCTURE OF A CA+2 DEPENDENT PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C (PI-PLC) ENZYME FROM STREPTOMYCES ANTIBIOTICUS
Authors
:
M. R. Jackson, T. L. Selby
Date
:
21 Apr 09 (Deposition) - 12 May 10 (Release) - 12 May 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.23
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Pi-Plc, Ca2+-Dependent, Catalytic Tim Barrel, Disulfide-Linked Helix- Loop, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. R. Jackson, T. L. Selby
Crystal Structure Of A Ca2+-Dependent Pi-Plc
To Be Published
[
close entry info
]
Hetero Components
(5, 32)
Info
All Hetero Components
1a: ACETYL GROUP (ACEa)
1b: ACETYL GROUP (ACEb)
1c: ACETYL GROUP (ACEc)
1d: ACETYL GROUP (ACEd)
1e: ACETYL GROUP (ACEe)
2a: ACETATE ION (ACTa)
2b: ACETATE ION (ACTb)
2c: ACETATE ION (ACTc)
3a: CHLORIDE ION (CLa)
4a: ETHANOL (EOHa)
4b: ETHANOL (EOHb)
4c: ETHANOL (EOHc)
4d: ETHANOL (EOHd)
4e: ETHANOL (EOHe)
4f: ETHANOL (EOHf)
4g: ETHANOL (EOHg)
4h: ETHANOL (EOHh)
4i: ETHANOL (EOHi)
4j: ETHANOL (EOHj)
4k: ETHANOL (EOHk)
4l: ETHANOL (EOHl)
4m: ETHANOL (EOHm)
4n: ETHANOL (EOHn)
4o: ETHANOL (EOHo)
4p: ETHANOL (EOHp)
4q: ETHANOL (EOHq)
4r: ETHANOL (EOHr)
4s: ETHANOL (EOHs)
4t: ETHANOL (EOHt)
5a: GLYCEROL (GOLa)
5b: GLYCEROL (GOLb)
5c: GLYCEROL (GOLc)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACE
5
Mod. Amino Acid
ACETYL GROUP
2
ACT
3
Ligand/Ion
ACETATE ION
3
CL
1
Ligand/Ion
CHLORIDE ION
4
EOH
20
Ligand/Ion
ETHANOL
5
GOL
3
Ligand/Ion
GLYCEROL
[
close Hetero Component info
]
Sites
(32, 32)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
THR A:27 , GLY A:29 , GLY A:178 , TRP A:179 , HOH A:636
BINDING SITE FOR RESIDUE CL A 340
02
AC2
SOFTWARE
ARG A:246 , ALA A:248 , GOL A:364
BINDING SITE FOR RESIDUE EOH A 341
03
AC3
SOFTWARE
HOH A:454 , HOH A:755
BINDING SITE FOR RESIDUE EOH A 342
04
AC4
SOFTWARE
ALA A:92 , GLU A:144 , ALA A:147 , HOH A:597 , HOH A:610 , HOH A:673 , HOH A:674
BINDING SITE FOR RESIDUE EOH A 343
05
AC5
SOFTWARE
ARG A:112 , ARG A:150 , GLN A:151 , HOH A:388
BINDING SITE FOR RESIDUE EOH A 344
06
AC6
SOFTWARE
ARG A:100
BINDING SITE FOR RESIDUE EOH A 345
07
AC7
SOFTWARE
ALA A:67 , LEU A:68 , ASN A:135 , GLY A:138 , ARG A:140 , HOH A:462
BINDING SITE FOR RESIDUE EOH A 346
08
AC8
SOFTWARE
TRP A:208 , HOH A:602 , HOH A:754
BINDING SITE FOR RESIDUE EOH A 347
09
AC9
SOFTWARE
ASP A:262 , ASN A:290 , HOH A:708
BINDING SITE FOR RESIDUE EOH A 348
10
BC1
SOFTWARE
ALA A:105 , GLY A:106 , SER A:109 , LYS A:152 , EOH A:355 , HOH A:539 , HOH A:560 , HOH A:582
BINDING SITE FOR RESIDUE EOH A 349
11
BC2
SOFTWARE
SER A:93 , GLU A:94 , LYS A:225 , GLN A:228
BINDING SITE FOR RESIDUE EOH A 350
12
BC3
SOFTWARE
PRO A:119 , GLY A:120 , HOH A:479
BINDING SITE FOR RESIDUE EOH A 351
13
BC4
SOFTWARE
ASP A:277 , THR A:278 , HIS A:280 , HOH A:443 , HOH A:486 , HOH A:691
BINDING SITE FOR RESIDUE EOH A 352
14
BC5
SOFTWARE
HIS A:216 , ACE A:367 , ACE A:368 , HOH A:481 , HOH A:681
BINDING SITE FOR RESIDUE EOH A 353
15
BC6
SOFTWARE
LYS A:137 , GLY A:138 , GLY A:139 , HOH A:533
BINDING SITE FOR RESIDUE EOH A 354
16
BC7
SOFTWARE
ALA A:105 , EOH A:349 , HOH A:494 , HOH A:501
BINDING SITE FOR RESIDUE EOH A 355
17
BC8
SOFTWARE
TYR A:325 , PRO A:326 , HOH A:407 , HOH A:544
BINDING SITE FOR RESIDUE EOH A 356
18
BC9
SOFTWARE
ASN A:66 , HIS A:167 , HOH A:503 , HOH A:687
BINDING SITE FOR RESIDUE EOH A 357
19
CC1
SOFTWARE
GLU A:60 , LYS A:127 , ILE A:194 , HIS A:236 , ASP A:260 , HOH A:438 , HOH A:548 , HOH A:747
BINDING SITE FOR RESIDUE EOH A 358
20
CC2
SOFTWARE
ALA A:183 , ALA A:186 , HOH A:426 , HOH A:534
BINDING SITE FOR RESIDUE EOH A 359
21
CC3
SOFTWARE
GLY A:81 , HOH A:395
BINDING SITE FOR RESIDUE EOH A 360
22
CC4
SOFTWARE
HIS A:115 , ASP A:155 , HOH A:420 , HOH A:530 , HOH A:626
BINDING SITE FOR RESIDUE ACT A 361
23
CC5
SOFTWARE
ASP A:262 , HOH A:522 , HOH A:557 , HOH A:658
BINDING SITE FOR RESIDUE ACT A 362
24
CC6
SOFTWARE
PRO A:293 , VAL A:294 , ILE A:295 , GLU A:304 , HOH A:477 , HOH A:490 , HOH A:613
BINDING SITE FOR RESIDUE ACT A 363
25
CC7
SOFTWARE
ALA A:239 , PRO A:240 , ASP A:242 , PRO A:243 , GLU A:245 , ARG A:246 , ALA A:248 , EOH A:341 , HOH A:574 , HOH A:592 , HOH A:737
BINDING SITE FOR RESIDUE GOL A 364
26
CC8
SOFTWARE
GLN A:223 , GLY A:224 , LYS A:225 , HOH A:373
BINDING SITE FOR RESIDUE GOL A 365
27
CC9
SOFTWARE
ARG A:70 , SER A:71 , GLY A:138 , GLY A:139 , ARG A:140 , HOH A:501 , HOH A:643
BINDING SITE FOR RESIDUE GOL A 366
28
DC1
SOFTWARE
SER A:93 , ALA A:143 , GLU A:144 , EOH A:353 , ACE A:368
BINDING SITE FOR RESIDUE ACE A 367
29
DC2
SOFTWARE
ALA A:136 , GLY A:141 , PRO A:142 , ALA A:143 , GLU A:144 , EOH A:353 , ACE A:367 , ACE A:370 , HOH A:489
BINDING SITE FOR RESIDUE ACE A 368
30
DC3
SOFTWARE
GLY A:241 , ASP A:242 , PRO A:250 , HOH A:571 , HOH A:580 , HOH A:592
BINDING SITE FOR RESIDUE ACE A 369
31
DC4
SOFTWARE
PRO A:142 , GLU A:212 , ACE A:368 , HOH A:396
BINDING SITE FOR RESIDUE ACE A 370
32
DC5
SOFTWARE
LYS A:42 , ASN A:83 , ASP A:101 , ALA A:183 , ASP A:184 , HOH A:452 , HOH A:555 , HOH A:649
BINDING SITE FOR RESIDUE ACE A 371
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
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]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
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Label:
Sorry, no Info available
[
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]
CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
[
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]
Atom Selection
(currently selected atoms:
all
)
Protein
Nucleic
Backbone
Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
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select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
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Asym.Unit (120 KB)
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