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3H4H
Asym. Unit
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Asym.Unit (185 KB)
Biol.Unit 1 (180 KB)
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(1)
Title
:
MET94THR/PHE312CYS VARIANT OF NITRITE REDUCTASE FROM ALCALIGENES FAECALIS
Authors
:
I. S. Macpherson, I. S. Murphy
Date
:
20 Apr 09 (Deposition) - 02 Feb 10 (Release) - 16 Feb 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
Nitrite Reductase, High-Throuhput Screening, Oxidase, Copper, Fad, Flavoprotein, Metal-Binding, Nitrate Assimilation, Oxidoreductase, Periplasm, Pyrrolidone Carboxylic Acid
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
I. S. Macpherson, F. I. Rosell, M. Scofield, A. G. Mauk, M. E. Murphy
Directed Evolution Of Copper Nitrite Reductase To A Chromogenic Reductant.
Protein Eng. Des. Sel. V. 23 137 2010
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Hetero Components
(2, 9)
Info
All Hetero Components
1a: 3-SULFINOALANINE (CSDa)
1b: 3-SULFINOALANINE (CSDb)
1c: 3-SULFINOALANINE (CSDc)
2a: COPPER (II) ION (CUa)
2b: COPPER (II) ION (CUb)
2c: COPPER (II) ION (CUc)
2d: COPPER (II) ION (CUd)
2e: COPPER (II) ION (CUe)
2f: COPPER (II) ION (CUf)
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Label:
No.
Name
Count
Type
Full Name
1
CSD
3
Mod. Amino Acid
3-SULFINOALANINE
2
CU
6
Ligand/Ion
COPPER (II) ION
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:95 , CYS A:136 , HIS A:145 , MET A:150
BINDING SITE FOR RESIDUE CU A 1501
2
AC2
SOFTWARE
HIS A:100 , HIS A:135 , HOH A:1337 , HIS B:306
BINDING SITE FOR RESIDUE CU A 1502
3
AC3
SOFTWARE
HIS B:95 , CYS B:136 , HIS B:145 , MET B:150
BINDING SITE FOR RESIDUE CU B 2501
4
AC4
SOFTWARE
ASP B:98 , HIS B:100 , HIS B:135 , HOH B:1346 , HIS C:306
BINDING SITE FOR RESIDUE CU B 2502
5
AC5
SOFTWARE
HIS C:95 , CYS C:136 , HIS C:145 , MET C:150
BINDING SITE FOR RESIDUE CU C 3501
6
AC6
SOFTWARE
HIS A:306 , ASP C:98 , HIS C:100 , HIS C:135 , HOH C:1339
BINDING SITE FOR RESIDUE CU C 3502
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d3h4ha1 (A:5-161)
1b: SCOP_d3h4ha2 (A:162-339)
1c: SCOP_d3h4hb1 (B:5-161)
1d: SCOP_d3h4hb2 (B:162-339)
1e: SCOP_d3h4hc1 (C:5-161)
1f: SCOP_d3h4hc2 (C:162-339)
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Class
:
All beta proteins
(24004)
Fold
:
Cupredoxin-like
(545)
Superfamily
:
Cupredoxins
(543)
Family
:
automated matches
(57)
Protein domain
:
automated matches
(57)
Alcaligenes faecalis [TaxId: 511]
(9)
1a
d3h4ha1
A:5-161
1b
d3h4ha2
A:162-339
1c
d3h4hb1
B:5-161
1d
d3h4hb2
B:162-339
1e
d3h4hc1
C:5-161
1f
d3h4hc2
C:162-339
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CATH Domains
(1, 6)
Info
all CATH domains
1a: CATH_3h4hA01 (A:11-158)
1b: CATH_3h4hA02 (A:159-325)
1c: CATH_3h4hB02 (B:159-325)
1d: CATH_3h4hC02 (C:159-325)
1e: CATH_3h4hB01 (B:11-158)
1f: CATH_3h4hC01 (C:11-158)
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Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Cupredoxins - blue copper proteins
(420)
Alcaligenes faecalis. Organism_taxid: 511. Strain: s-6.
(24)
1a
3h4hA01
A:11-158
1b
3h4hA02
A:159-325
1c
3h4hB02
B:159-325
1d
3h4hC02
C:159-325
1e
3h4hB01
B:11-158
1f
3h4hC01
C:11-158
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (185 KB)
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