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3GW8
Biol. Unit 1
Info
Asym.Unit (89 KB)
Biol.Unit 1 (44 KB)
Biol.Unit 2 (43 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PHOSPHOGLYCEROMUTASE FROM BURKHOLDERIA PSEUDOMALLEI WITH VANADATE AND GLYCEROL
Authors
:
Seattle Structural Genomics Center For Infectious Disease (S
Date
:
31 Mar 09 (Deposition) - 07 Apr 09 (Release) - 05 Oct 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.93
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Ssgcid, Niaid, Decode, Uwppg, Sbri, Glycolysis, Isomerase, Structural Genomics, Seattle Structural Genomics Center For Infectious Disease
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. R. Davies, B. L. Staker, J. A. Abendroth, T. E. Edwards, R. Hartley, J. Leonard, H. Kim, A. L. Rychel, S. N. Hewitt, P. J. Myler, L. J. Stewart
An Ensemble Of Structures Of Burkholderia Pseudomallei 2, 3-Bisphosphoglycerate-Dependent Phosphoglycerate Mutase.
Acta Crystallogr. , Sect. F V. 67 1044 2011
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Hetero Components
(3, 6)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
2a: TETRAETHYLENE GLYCOL (PG4a)
2b: TETRAETHYLENE GLYCOL (PG4b)
2c: TETRAETHYLENE GLYCOL (PG4c)
2d: TETRAETHYLENE GLYCOL (PG4d)
3a: VANADATE ION (VO4a)
3b: VANADATE ION (VO4b)
3c: VANADATE ION (VO4c)
3d: VANADATE ION (VO4d)
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No.
Name
Count
Type
Full Name
1
GOL
1
Ligand/Ion
GLYCEROL
2
PG4
3
Ligand/Ion
TETRAETHYLENE GLYCOL
3
VO4
2
Ligand/Ion
VANADATE ION
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:8 , HIS A:9 , ASN A:15 , ARG A:60 , GLU A:87 , HIS A:182 , GLY A:183 , HOH A:313 , GOL A:402
BINDING SITE FOR RESIDUE VO4 A 401
2
AC2
SOFTWARE
ARG A:8 , ASN A:15 , ARG A:19 , PHE A:20 , THR A:21 , GLY A:22 , GLU A:87 , TYR A:90 , HOH A:255 , HOH A:383 , VO4 A:401 , VO4 A:403
BINDING SITE FOR RESIDUE GOL A 402
3
AC3
SOFTWARE
PHE A:20 , TYR A:90 , LYS A:98 , ASN A:184 , HOH A:255 , GOL A:402
BINDING SITE FOR RESIDUE VO4 A 403
4
AC4
SOFTWARE
ILE A:196 , LEU A:204 , HIS A:225 , HOH A:414
BINDING SITE FOR RESIDUE PG4 A 501
5
AC5
SOFTWARE
ALA A:173 , LYS A:175
BINDING SITE FOR RESIDUE PG4 A 502
6
AC6
SOFTWARE
LYS A:140 , HOH A:317 , ASP B:51 , LYS B:175
BINDING SITE FOR RESIDUE PG4 A 250
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: PG_MUTASE (A:6-15)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PG_MUTASE
PS00175
Phosphoglycerate mutase family phosphohistidine signature.
GPMA_BURP1
6-15
1
A:6-15
-
GPMA_BURPS
6-15
1
A:6-15
-
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3gw8a_ (A:)
1b: SCOP_d3gw8b_ (B:)
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Protein Domains
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Organisms
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(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Phosphoglycerate mutase-like
(103)
Superfamily
:
Phosphoglycerate mutase-like
(103)
Family
:
Cofactor-dependent phosphoglycerate mutase
(57)
Protein domain
:
automated matches
(41)
Burkholderia pseudomallei [TaxId: 28450]
(3)
1a
d3gw8a_
A:
1b
d3gw8b_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_3gw8A00 (A:1-230)
1b: CATH_3gw8B00 (B:1-230)
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Organisms
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(
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
Phosphoglycerate mutase-like
(91)
Pseudomonas pseudomallei (Burkholderia pseudomallei)
(3)
1a
3gw8A00
A:1-230
1b
3gw8B00
B:1-230
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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Asym.Unit (89 KB)
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Biol.Unit 1 (44 KB)
Header - Biol.Unit 1
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