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3GU4
Asym. Unit
Info
Asym.Unit (62 KB)
Biol.Unit 1 (57 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF DAPKQ23V-AMPPNP
Authors
:
L. K. Mcnamara, J. S. Schavocky, D. M. Watterson, J. S. Brunzelle
Date
:
28 Mar 09 (Deposition) - 09 Mar 10 (Release) - 09 Mar 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.35
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Glycine-Rich Loop Mutant, Kinase-Amppnp Complex, Alternative Splicing, Ank Repeat, Apoptosis, Atp-Binding, Calmodulin- Binding, Cytoplasm, Kinase, Nucleotide-Binding, Phosphoprotein, Polymorphism, Serine/Threonine-Protein Kinase, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. K. Mcnamara, J. S. Schavocky, D. M. Watterson, J. S. Brunzelle
Enzymatic Activity And Crystallgoraphic Analyses Of A Glycine-Rich Loop Mutant Of Dapk
To Be Published
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ANP
1
Ligand/Ion
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
[
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LEU A:19 , GLY A:20 , SER A:21 , GLY A:22 , VAL A:23 , ALA A:25 , VAL A:27 , ALA A:40 , LYS A:42 , ILE A:77 , GLU A:94 , VAL A:96 , GLU A:100 , ASP A:139 , GLU A:143 , MET A:146 , ILE A:160 , ASP A:161 , HOH A:340 , HOH A:349 , HOH A:466 , HOH A:506 , HOH A:622
BINDING SITE FOR RESIDUE ANP A 296
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:19-46)
2: PROTEIN_KINASE_ST (A:135-147)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
DAPK1_HUMAN
19-46
1
A:19-46
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
DAPK1_HUMAN
135-147
1
A:135-147
[
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Exons
(9, 9)
Info
All Exons
Exon 1.4a (A:2-21)
Exon 1.6 (A:21-95)
Exon 1.7b (A:95-141)
Exon 1.8a (A:142-185)
Exon 1.9a (A:185-201)
Exon 1.9c (A:201-210)
Exon 1.10b (A:210-261)
Exon 1.11 (A:261-276)
Exon 1.12 (A:277-294 (gaps))
View:
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All Exon Boundaries
01: Boundary 1.1/1.4a
02: Boundary 1.4a/1.6
03: Boundary 1.6/1.7b
04: Boundary 1.7b/1.8a
05: Boundary 1.8a/1.9a
06: Boundary 1.9a/1.9c
07: Boundary 1.9c/1.10b
08: Boundary 1.10b/1.11
09: Boundary 1.11/1.12
10: Boundary 1.12/1.13
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000358077
1
ENSE00001835417
chr9:
90112143-90112217
75
DAPK1_HUMAN
-
0
0
-
-
1.4a
ENST00000358077
4a
ENSE00002143630
chr9:
90113885-90114054
170
DAPK1_HUMAN
1-21
21
1
A:2-21
20
1.6
ENST00000358077
6
ENSE00001585224
chr9:
90219869-90220090
222
DAPK1_HUMAN
21-95
75
1
A:21-95
75
1.7b
ENST00000358077
7b
ENSE00001584756
chr9:
90252858-90252996
139
DAPK1_HUMAN
95-141
47
1
A:95-141
47
1.8a
ENST00000358077
8a
ENSE00001581455
chr9:
90254269-90254398
130
DAPK1_HUMAN
142-185
44
1
A:142-185
44
1.9a
ENST00000358077
9a
ENSE00001579437
chr9:
90254565-90254613
49
DAPK1_HUMAN
185-201
17
1
A:185-201
17
1.9c
ENST00000358077
9c
ENSE00001582629
chr9:
90254704-90254730
27
DAPK1_HUMAN
201-210
10
1
A:201-210
10
1.10b
ENST00000358077
10b
ENSE00001578538
chr9:
90255213-90255365
153
DAPK1_HUMAN
210-261
52
1
A:210-261
52
1.11
ENST00000358077
11
ENSE00001589379
chr9:
90255717-90255762
46
DAPK1_HUMAN
261-276
16
1
A:261-276
16
1.12
ENST00000358077
12
ENSE00001582911
chr9:
90256884-90256973
90
DAPK1_HUMAN
277-306
30
1
A:277-294 (gaps)
18
1.13
ENST00000358077
13
ENSE00001586474
chr9:
90258291-90258383
93
DAPK1_HUMAN
307-337
31
0
-
-
1.14
ENST00000358077
14
ENSE00001576625
chr9:
90260810-90260929
120
DAPK1_HUMAN
338-377
40
0
-
-
1.15
ENST00000358077
15
ENSE00001578552
chr9:
90261376-90261474
99
DAPK1_HUMAN
378-410
33
0
-
-
1.16
ENST00000358077
16
ENSE00001582147
chr9:
90262220-90262318
99
DAPK1_HUMAN
411-443
33
0
-
-
1.17c
ENST00000358077
17c
ENSE00001578139
chr9:
90263696-90263794
99
DAPK1_HUMAN
444-476
33
0
-
-
1.18a
ENST00000358077
18a
ENSE00001585930
chr9:
90264836-90265033
198
DAPK1_HUMAN
477-542
66
0
-
-
1.19b
ENST00000358077
19b
ENSE00001585105
chr9:
90266442-90266639
198
DAPK1_HUMAN
543-608
66
0
-
-
1.20b
ENST00000358077
20b
ENSE00001579962
chr9:
90272944-90273042
99
DAPK1_HUMAN
609-641
33
0
-
-
1.22b
ENST00000358077
22b
ENSE00001583161
chr9:
90283512-90283589
78
DAPK1_HUMAN
642-667
26
0
-
-
1.23b
ENST00000358077
23b
ENSE00001583090
chr9:
90296319-90296541
223
DAPK1_HUMAN
668-742
75
0
-
-
1.24
ENST00000358077
24
ENSE00001581009
chr9:
90301466-90301654
189
DAPK1_HUMAN
742-805
64
0
-
-
1.25
ENST00000358077
25
ENSE00001580571
chr9:
90311922-90312119
198
DAPK1_HUMAN
805-871
67
0
-
-
1.26b
ENST00000358077
26b
ENSE00001588489
chr9:
90313571-90313709
139
DAPK1_HUMAN
871-917
47
0
-
-
1.27b
ENST00000358077
27b
ENSE00001583431
chr9:
90315032-90315152
121
DAPK1_HUMAN
917-957
41
0
-
-
1.28
ENST00000358077
28
ENSE00001586524
chr9:
90317944-90318132
189
DAPK1_HUMAN
958-1020
63
0
-
-
1.29e
ENST00000358077
29e
ENSE00001905075
chr9:
90321047-90323546
2500
DAPK1_HUMAN
1021-1430
410
0
-
-
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3gu4a_ (A:)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
automated matches
(542)
Human (Homo sapiens) [TaxId: 9606]
(452)
1a
d3gu4a_
A:
[
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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