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3GR9
Biol. Unit 4
Info
Asym.Unit (511 KB)
Biol.Unit 1 (131 KB)
Biol.Unit 2 (132 KB)
Biol.Unit 3 (130 KB)
Biol.Unit 4 (131 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF COLD H188K S187N
Authors
:
H. M. Holden, P. D. Cook, R. L. Kubiak, D. P. Toomey
Date
:
25 Mar 09 (Deposition) - 16 Jun 09 (Release) - 03 May 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Keywords
:
Colitose, Perosamine, Plp, Aminotransferase, O-Antigen, Lipopolysaccharide, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. D. Cook, R. L. Kubiak, D. P. Toomey, H. M. Holden
Two Site-Directed Mutations Are Required For The Conversion Of A Sugar Dehydratase Into An Aminotransferase.
Biochemistry V. 48 5246 2009
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: 2-OXOGLUTARIC ACID (AKGa)
1b: 2-OXOGLUTARIC ACID (AKGb)
1c: 2-OXOGLUTARIC ACID (AKGc)
1d: 2-OXOGLUTARIC ACID (AKGd)
1e: 2-OXOGLUTARIC ACID (AKGe)
1f: 2-OXOGLUTARIC ACID (AKGf)
2a: (2S)-2-AMINO-6-[[3-HYDROXY-2-METHY... (LLPa)
2b: (2S)-2-AMINO-6-[[3-HYDROXY-2-METHY... (LLPb)
2c: (2S)-2-AMINO-6-[[3-HYDROXY-2-METHY... (LLPc)
2d: (2S)-2-AMINO-6-[[3-HYDROXY-2-METHY... (LLPd)
2e: (2S)-2-AMINO-6-[[3-HYDROXY-2-METHY... (LLPe)
2f: (2S)-2-AMINO-6-[[3-HYDROXY-2-METHY... (LLPf)
2g: (2S)-2-AMINO-6-[[3-HYDROXY-2-METHY... (LLPg)
2h: (2S)-2-AMINO-6-[[3-HYDROXY-2-METHY... (LLPh)
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No.
Name
Count
Type
Full Name
1
AKG
1
Ligand/Ion
2-OXOGLUTARIC ACID
2
LLP
2
Mod. Amino Acid
(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC ACID
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Sites
(1, 1)
Info
All Sites
1: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC6
SOFTWARE
TRP G:88 , PHE G:185 , LLP G:188 , ARG G:331 , HIS H:215 , TRP H:217 , ARG H:250 , HOH H:421 , HOH H:431
BINDING SITE FOR RESIDUE AKG H 406
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(0, 0)
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CATH Domains
(2, 16)
Info
all CATH domains
1a: CATH_3gr9D01 (D:8-264)
1b: CATH_3gr9H01 (H:8-264)
1c: CATH_3gr9A01 (A:5-264)
1d: CATH_3gr9E01 (E:5-264)
1e: CATH_3gr9B01 (B:4-264)
1f: CATH_3gr9F01 (F:3-264)
1g: CATH_3gr9G01 (G:2-264)
1h: CATH_3gr9C01 (C:1-264)
2a: CATH_3gr9A02 (A:265-388)
2b: CATH_3gr9B02 (B:265-388)
2c: CATH_3gr9C02 (C:265-388)
2d: CATH_3gr9D02 (D:265-388)
2e: CATH_3gr9F02 (F:265-388)
2f: CATH_3gr9G02 (G:265-388)
2g: CATH_3gr9H02 (H:265-388)
2h: CATH_3gr9E02 (E:265-387)
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Organisms
(
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(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Aspartate Aminotransferase; domain 2
(384)
Homologous Superfamily
:
Type I PLP-dependent aspartate aminotransferase-like (Major domain)
(384)
Escherichia coli. Organism_taxid: 562. Strain: o55.
(1)
1a
3gr9D01
D:8-264
1b
3gr9H01
H:8-264
1c
3gr9A01
A:5-264
1d
3gr9E01
E:5-264
1e
3gr9B01
B:4-264
1f
3gr9F01
F:3-264
1g
3gr9G01
G:2-264
1h
3gr9C01
C:1-264
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Aspartate Aminotransferase, domain 1
(355)
Homologous Superfamily
:
Aspartate Aminotransferase, domain 1
(354)
Escherichia coli. Organism_taxid: 562. Strain: o55.
(1)
2a
3gr9A02
A:265-388
2b
3gr9B02
B:265-388
2c
3gr9C02
C:265-388
2d
3gr9D02
D:265-388
2e
3gr9F02
F:265-388
2f
3gr9G02
G:265-388
2g
3gr9H02
H:265-388
2h
3gr9E02
E:265-387
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (511 KB)
Header - Asym.Unit
Biol.Unit 1 (131 KB)
Header - Biol.Unit 1
Biol.Unit 2 (132 KB)
Header - Biol.Unit 2
Biol.Unit 3 (130 KB)
Header - Biol.Unit 3
Biol.Unit 4 (131 KB)
Header - Biol.Unit 4
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