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3GP3
Biol. Unit 2
Info
Asym.Unit (174 KB)
Biol.Unit 1 (45 KB)
Biol.Unit 2 (44 KB)
Biol.Unit 3 (45 KB)
Biol.Unit 4 (44 KB)
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Title
:
CRYSTAL STRUCTURE OF PHOSPHOGLYCEROMUTASE FROM BURKHOLDERIA PSEUDOMALLEI WITH 2-PHOSPHOSERINE
Authors
:
Seattle Structural Genomics Center For Infectious Disease (S
Date
:
20 Mar 09 (Deposition) - 31 Mar 09 (Release) - 05 Oct 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Phosphoglyceromutase, Decode, Sbri, Niaid, Uwppg, Glycolysis, Isomerase, Structural Genomics, Seattle Structural Genomics Center For Infectious Disease, Ssgcid
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
D. R. Davies, B. L. Staker, J. A. Abendroth, T. E. Edwards, R. Hartley, J. Leonard, H. Kim, A. L. Rychel, S. N. Hewitt, P. J. Myler, L. J. Stewart
An Ensemble Of Structures Of Burkholderia Pseudomallei 2, 3-Bisphosphoglycerate-Dependent Phosphoglycerate Mutase.
Acta Crystallogr. , Sect. F V. 67 1044 2011
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Hetero Components
(3, 3)
Info
All Hetero Components
1a: TETRAETHYLENE GLYCOL (PG4a)
1b: TETRAETHYLENE GLYCOL (PG4b)
1c: TETRAETHYLENE GLYCOL (PG4c)
1d: TETRAETHYLENE GLYCOL (PG4d)
1e: TETRAETHYLENE GLYCOL (PG4e)
1f: TETRAETHYLENE GLYCOL (PG4f)
2a: PHOSPHITE ION (PO3a)
2b: PHOSPHITE ION (PO3b)
2c: PHOSPHITE ION (PO3c)
2d: PHOSPHITE ION (PO3d)
3a: PHOSPHOSERINE (SEPa)
3b: PHOSPHOSERINE (SEPb)
3c: PHOSPHOSERINE (SEPc)
3d: PHOSPHOSERINE (SEPd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
PG4
1
Ligand/Ion
TETRAETHYLENE GLYCOL
2
PO3
1
Ligand/Ion
PHOSPHITE ION
3
SEP
1
Mod. Residue
PHOSPHOSERINE
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Sites
(3, 3)
Info
All Sites
1: AC4 (SOFTWARE)
2: AC5 (SOFTWARE)
3: AC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC4
SOFTWARE
ASP B:51 , ALA B:173 , LYS B:175
BINDING SITE FOR RESIDUE PG4 B 250
2
AC5
SOFTWARE
ARG B:8 , HIS B:9 , ASN B:15 , ARG B:60 , GLU B:87 , HIS B:182 , GLY B:183 , SEP B:252 , HOH B:279
BINDING SITE FOR RESIDUE PO3 B 251
3
AC6
SOFTWARE
ARG B:8 , ASN B:15 , ARG B:19 , THR B:21 , GLY B:22 , GLU B:87 , TYR B:90 , LYS B:98 , ARG B:114 , ARG B:115 , ASN B:184 , PO3 B:251 , HOH B:299
BINDING SITE FOR RESIDUE SEP B 252
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: PG_MUTASE (B:6-15)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PG_MUTASE
PS00175
Phosphoglycerate mutase family phosphohistidine signature.
GPMA_BURP1
6-15
1
-
B:6-15
-
-
GPMA_BURPS
6-15
1
-
B:6-15
-
-
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3gp3a_ (A:)
1b: SCOP_d3gp3b_ (B:)
1c: SCOP_d3gp3c_ (C:)
1d: SCOP_d3gp3d_ (D:)
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Protein Domains
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(
)
Organisms
(
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(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Phosphoglycerate mutase-like
(103)
Superfamily
:
Phosphoglycerate mutase-like
(103)
Family
:
Cofactor-dependent phosphoglycerate mutase
(57)
Protein domain
:
automated matches
(41)
Burkholderia pseudomallei [TaxId: 28450]
(3)
1a
d3gp3a_
A:
1b
d3gp3b_
B:
1c
d3gp3c_
C:
1d
d3gp3d_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_3gp3A00 (A:1-229)
1b: CATH_3gp3B00 (B:1-229)
1c: CATH_3gp3C00 (C:1-230)
1d: CATH_3gp3D00 (D:1-230)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
Phosphoglycerate mutase-like
(91)
Pseudomonas pseudomallei (Burkholderia pseudomallei)
(3)
1a
3gp3A00
A:1-229
1b
3gp3B00
B:1-229
1c
3gp3C00
C:1-230
1d
3gp3D00
D:1-230
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Pfam Domains
(0, 0)
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Chain B
Asymmetric Unit 1
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Asym.Unit (174 KB)
Header - Asym.Unit
Biol.Unit 1 (45 KB)
Header - Biol.Unit 1
Biol.Unit 2 (44 KB)
Header - Biol.Unit 2
Biol.Unit 3 (45 KB)
Header - Biol.Unit 3
Biol.Unit 4 (44 KB)
Header - Biol.Unit 4
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