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3GOK
Biol. Unit 5
Info
Asym.Unit (590 KB)
Biol.Unit 1 (568 KB)
Biol.Unit 10 (56 KB)
Biol.Unit 11 (55 KB)
Biol.Unit 12 (55 KB)
Biol.Unit 13 (56 KB)
Biol.Unit 14 (55 KB)
Biol.Unit 15 (55 KB)
Biol.Unit 16 (56 KB)
Biol.Unit 17 (55 KB)
Biol.Unit 2 (148 KB)
Biol.Unit 3 (148 KB)
Biol.Unit 4 (149 KB)
Biol.Unit 5 (148 KB)
Biol.Unit 6 (55 KB)
Biol.Unit 7 (56 KB)
Biol.Unit 8 (55 KB)
Biol.Unit 9 (54 KB)
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(1)
Title
:
BINDING SITE MAPPING OF PROTEIN LIGANDS
Authors
:
C. Scheich
Date
:
19 Mar 09 (Deposition) - 02 Mar 10 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.20
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L (1x)
Biol. Unit 2: A,B,C (1x)
Biol. Unit 3: D,E,F (1x)
Biol. Unit 4: G,H,I (1x)
Biol. Unit 5: J,K,L (1x)
Biol. Unit 6: A (1x)
Biol. Unit 7: B (1x)
Biol. Unit 8: C (1x)
Biol. Unit 9: D (1x)
Biol. Unit 10: E (1x)
Biol. Unit 11: F (1x)
Biol. Unit 12: G (1x)
Biol. Unit 13: H (1x)
Biol. Unit 14: I (1x)
Biol. Unit 15: J (1x)
Biol. Unit 16: K (1x)
Biol. Unit 17: L (1x)
Keywords
:
Mk2, Mapkap Kinase 2, Isotope Labelling, Insect Cell Expression, Atp- Binding, Kinase, Nucleotide-Binding, Phosphoprotein, Serine/Threonine-Protein Kinase, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Scheich, M. A. Smith, J. D. Barker, J. Kahmann, T. Hesterkamp, M. Schade
Binding Site Mapping Of Protein Ligands
To Be Published
[
close entry info
]
Hetero Components
(1, 3)
Info
All Hetero Components
1a: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,... (P4Oa)
1b: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,... (P4Ob)
1c: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,... (P4Oc)
1d: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,... (P4Od)
1e: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,... (P4Oe)
1f: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,... (P4Of)
1g: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,... (P4Og)
1h: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,... (P4Oh)
1i: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,... (P4Oi)
1j: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,... (P4Oj)
1k: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,... (P4Ok)
1l: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,... (P4Ol)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
P4O
3
Ligand/Ion
2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,5,6,7-TETRAHYDRO-4H-PYRROLO[3,2-C]PYRIDIN-4-ONE
[
close Hetero Component info
]
Sites
(3, 3)
Info
All Sites
1: BC1 (SOFTWARE)
2: BC2 (SOFTWARE)
3: BC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
BC1
SOFTWARE
LEU J:70 , LEU J:72 , GLY J:73 , VAL J:78 , ALA J:91 , LYS J:93 , GLU J:139 , CYS J:140 , LEU J:141 , ASN J:191 , LEU J:193 , ASP J:207
BINDING SITE FOR RESIDUE P4O J 1
2
BC2
SOFTWARE
LEU K:70 , LEU K:72 , GLY K:73 , LYS K:93 , GLU K:139 , CYS K:140 , LEU K:141 , ASP K:142 , ASN K:191 , LEU K:193 , THR K:206 , ASP K:207
BINDING SITE FOR RESIDUE P4O K 1
3
BC3
SOFTWARE
LEU L:70 , LEU L:72 , GLY L:73 , VAL L:78 , LYS L:93 , GLU L:139 , LEU L:141 , ASP L:142 , ASN L:191 , LEU L:193 , ASP L:207
BINDING SITE FOR RESIDUE P4O L 1
[
close Site info
]
SAPs(SNPs)/Variants
(1, 3)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_040753 (A173G, chain J/K/L, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_040753
A
173
G
MAPK2_HUMAN
Polymorphism
35671930
J/K/L
A
173
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(2, 6)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (J:70-93,K:70-93,L:70-93)
2: PROTEIN_KINASE_ST (J:182-194,K:182-194,L:182-194)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
MAPK2_HUMAN
70-93
3
-
-
-
-
-
-
-
-
-
J:70-93
K:70-93
L:70-93
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
MAPK2_HUMAN
182-194
3
-
-
-
-
-
-
-
-
-
J:182-194
K:182-194
L:182-194
[
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]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
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Label:
Sorry, no Info available
[
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]
CATH Domains
(2, 24)
Info
all CATH domains
1a: CATH_3gokA01 (A:59-140)
1b: CATH_3gokB01 (B:59-140)
1c: CATH_3gokC01 (C:59-140)
1d: CATH_3gokD01 (D:59-140)
1e: CATH_3gokE01 (E:59-140)
1f: CATH_3gokF01 (F:59-140)
1g: CATH_3gokG01 (G:59-140)
1h: CATH_3gokH01 (H:59-140)
1i: CATH_3gokI01 (I:59-140)
1j: CATH_3gokJ01 (J:59-140)
1k: CATH_3gokK01 (K:59-140)
1l: CATH_3gokL01 (L:59-140)
2a: CATH_3gokB02 (B:141-342)
2b: CATH_3gokE02 (E:141-342)
2c: CATH_3gokH02 (H:141-342)
2d: CATH_3gokK02 (K:141-342)
2e: CATH_3gokG02 (G:141-342)
2f: CATH_3gokA02 (A:141-342)
2g: CATH_3gokC02 (C:141-342)
2h: CATH_3gokF02 (F:141-342)
2i: CATH_3gokI02 (I:141-342)
2j: CATH_3gokL02 (L:141-342)
2k: CATH_3gokD02 (D:141-342)
2l: CATH_3gokJ02 (J:141-342)
View:
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(
)
(
)
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)
(
)
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(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
3gokA01
A:59-140
1b
3gokB01
B:59-140
1c
3gokC01
C:59-140
1d
3gokD01
D:59-140
1e
3gokE01
E:59-140
1f
3gokF01
F:59-140
1g
3gokG01
G:59-140
1h
3gokH01
H:59-140
1i
3gokI01
I:59-140
1j
3gokJ01
J:59-140
1k
3gokK01
K:59-140
1l
3gokL01
L:59-140
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
2a
3gokB02
B:141-342
2b
3gokE02
E:141-342
2c
3gokH02
H:141-342
2d
3gokK02
K:141-342
2e
3gokG02
G:141-342
2f
3gokA02
A:141-342
2g
3gokC02
C:141-342
2h
3gokF02
F:141-342
2i
3gokI02
I:141-342
2j
3gokL02
L:141-342
2k
3gokD02
D:141-342
2l
3gokJ02
J:141-342
[
close CATH info
]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Sorry, no Info available
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Asymmetric Unit 1
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Asym.Unit (590 KB)
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