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3GOA
Asym. Unit
Info
Asym.Unit (145 KB)
Biol.Unit 1 (138 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE SALMONELLA TYPHIMURIUM FADA 3-KETOACYL-COA THIOLASE
Authors
:
S. M. Anderson, T. Skarina, O. Onopriyenko, Z. Wawrzak, L. Papazisi, A. Savchenko, W. F. Anderson, Center For Structural Genomics Of Infectious Diseases (Csgid)
Date
:
18 Mar 09 (Deposition) - 31 Mar 09 (Release) - 31 Mar 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Metabolism, Fatty Acid, Phospholipid, Idp01071, Acyltransferase, Cytoplasm, Fatty Acid Metabolism, Lipid Degradation, Lipid Metabolism, Transferase, Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid
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Reference
:
(for further references see the
PDB file header
)
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Hetero Components
(4, 45)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
3a: SELENOMETHIONINE (MSEa)
3aa: SELENOMETHIONINE (MSEaa)
3ab: SELENOMETHIONINE (MSEab)
3ac: SELENOMETHIONINE (MSEac)
3ad: SELENOMETHIONINE (MSEad)
3ae: SELENOMETHIONINE (MSEae)
3af: SELENOMETHIONINE (MSEaf)
3ag: SELENOMETHIONINE (MSEag)
3ah: SELENOMETHIONINE (MSEah)
3ai: SELENOMETHIONINE (MSEai)
3aj: SELENOMETHIONINE (MSEaj)
3ak: SELENOMETHIONINE (MSEak)
3al: SELENOMETHIONINE (MSEal)
3am: SELENOMETHIONINE (MSEam)
3an: SELENOMETHIONINE (MSEan)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
3e: SELENOMETHIONINE (MSEe)
3f: SELENOMETHIONINE (MSEf)
3g: SELENOMETHIONINE (MSEg)
3h: SELENOMETHIONINE (MSEh)
3i: SELENOMETHIONINE (MSEi)
3j: SELENOMETHIONINE (MSEj)
3k: SELENOMETHIONINE (MSEk)
3l: SELENOMETHIONINE (MSEl)
3m: SELENOMETHIONINE (MSEm)
3n: SELENOMETHIONINE (MSEn)
3o: SELENOMETHIONINE (MSEo)
3p: SELENOMETHIONINE (MSEp)
3q: SELENOMETHIONINE (MSEq)
3r: SELENOMETHIONINE (MSEr)
3s: SELENOMETHIONINE (MSEs)
3t: SELENOMETHIONINE (MSEt)
3u: SELENOMETHIONINE (MSEu)
3v: SELENOMETHIONINE (MSEv)
3w: SELENOMETHIONINE (MSEw)
3x: SELENOMETHIONINE (MSEx)
3y: SELENOMETHIONINE (MSEy)
3z: SELENOMETHIONINE (MSEz)
4a: SODIUM ION (NAa)
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No.
Name
Count
Type
Full Name
1
CA
2
Ligand/Ion
CALCIUM ION
2
CL
2
Ligand/Ion
CHLORIDE ION
3
MSE
40
Mod. Amino Acid
SELENOMETHIONINE
4
NA
1
Ligand/Ion
SODIUM ION
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH B:419 , HOH B:694 , HOH B:756 , HOH B:773
BINDING SITE FOR RESIDUE CA B 388
2
AC2
SOFTWARE
HOH B:512 , HOH B:601 , HOH B:835 , HOH B:935 , HOH B:936
BINDING SITE FOR RESIDUE CA B 389
3
AC3
SOFTWARE
ALA A:9 , ARG A:41 , THR A:187 , GLU A:188 , ARG A:264 , ASN A:358
BINDING SITE FOR RESIDUE CL A 388
4
AC4
SOFTWARE
ALA A:265 , ARG A:266 , VAL A:387 , HOH A:934
BINDING SITE FOR RESIDUE CL A 389
5
AC5
SOFTWARE
ARG B:266 , GLU B:385 , HOH B:939
BINDING SITE FOR RESIDUE NA B 390
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(3, 6)
Info
All PROSITE Patterns/Profiles
1: THIOLASE_1 (A:87-105,B:87-105)
2: THIOLASE_2 (A:333-349,B:333-349)
3: THIOLASE_3 (A:368-381,B:368-381)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
THIOLASE_1
PS00098
Thiolases acyl-enzyme intermediate signature.
FADA_SALTY
87-105
2
A:87-105
B:87-105
2
THIOLASE_2
PS00737
Thiolases signature 2.
FADA_SALTY
333-349
2
A:333-349
B:333-349
3
THIOLASE_3
PS00099
Thiolases active site.
FADA_SALTY
368-381
2
A:368-381
B:368-381
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3goaa1 (A:1-259)
1b: SCOP_d3goaa2 (A:260-387)
1c: SCOP_d3goab1 (B:1-259)
1d: SCOP_d3goab2 (B:260-387)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thiolase-like
(231)
Superfamily
:
Thiolase-like
(231)
Family
:
automated matches
(108)
Protein domain
:
automated matches
(108)
Salmonella typhimurium [TaxId: 602]
(1)
1a
d3goaa1
A:1-259
1b
d3goaa2
A:260-387
1c
d3goab1
B:1-259
1d
d3goab2
B:260-387
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (145 KB)
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