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3GBX
Asym. Unit
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Asym.Unit (145 KB)
Biol.Unit 1 (136 KB)
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(1)
Title
:
SERINE HYDROXYMETHYLTRANSFERASE FROM SALMONELLA TYPHIMURIUM
Authors
:
J. Osipiuk, B. Nocek, M. Zhou, J. Stam, W. F. Anderson, A. Joachimiak, Ce Structural Genomics Of Infectious Diseases (Csgid)
Date
:
20 Feb 09 (Deposition) - 10 Mar 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Structural Genomics, Idp01011, Serine Hydroxymethyltransferase, Salmonella Typhimurium. , One-Carbon Metabolism, Pyridoxal Phosphate, Transferase, Center For Structural Genomics Of Infectious Diseases, Csgid
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
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Reference
:
J. Osipiuk, B. Nocek, M. Zhou, J. Stam, W. F. Anderson, A. Joachimiak
X-Ray Crystal Structure Of Serine Hydroxymethyltransferase From Salmonella Typhimurium.
To Be Published
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Hetero Components
(2, 27)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
2a: SELENOMETHIONINE (MSEa)
2b: SELENOMETHIONINE (MSEb)
2c: SELENOMETHIONINE (MSEc)
2d: SELENOMETHIONINE (MSEd)
2e: SELENOMETHIONINE (MSEe)
2f: SELENOMETHIONINE (MSEf)
2g: SELENOMETHIONINE (MSEg)
2h: SELENOMETHIONINE (MSEh)
2i: SELENOMETHIONINE (MSEi)
2j: SELENOMETHIONINE (MSEj)
2k: SELENOMETHIONINE (MSEk)
2l: SELENOMETHIONINE (MSEl)
2m: SELENOMETHIONINE (MSEm)
2n: SELENOMETHIONINE (MSEn)
2o: SELENOMETHIONINE (MSEo)
2p: SELENOMETHIONINE (MSEp)
2q: SELENOMETHIONINE (MSEq)
2r: SELENOMETHIONINE (MSEr)
2s: SELENOMETHIONINE (MSEs)
2t: SELENOMETHIONINE (MSEt)
2u: SELENOMETHIONINE (MSEu)
2v: SELENOMETHIONINE (MSEv)
2w: SELENOMETHIONINE (MSEw)
2x: SELENOMETHIONINE (MSEx)
2y: SELENOMETHIONINE (MSEy)
2z: SELENOMETHIONINE (MSEz)
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No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
MSE
26
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(1, 1)
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All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR B:196 , GLU B:247 , LYS B:251
BINDING SITE FOR RESIDUE ACT B 501
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
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1: SHMT (A:221-237,B:221-237)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SHMT
PS00096
Serine hydroxymethyltransferase pyridoxal-phosphate attachment site.
GLYA_SALTY
221-237
2
A:221-237
B:221-237
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
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1a: SCOP_d3gbxa_ (A:)
1b: SCOP_d3gbxb_ (B:)
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(
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
PLP-dependent transferase-like
(627)
Superfamily
:
PLP-dependent transferases
(625)
Family
:
GABA-aminotransferase-like
(167)
Protein domain
:
automated matches
(28)
Salmonella typhimurium [TaxId: 90371]
(1)
1a
d3gbxa_
A:
1b
d3gbxb_
B:
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_3gbxA01 (A:40-279)
1b: CATH_3gbxB01 (B:40-279)
2a: CATH_3gbxA02 (A:281-417)
2b: CATH_3gbxB02 (B:281-417)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Aspartate Aminotransferase; domain 2
(384)
Homologous Superfamily
:
Type I PLP-dependent aspartate aminotransferase-like (Major domain)
(384)
Salmonella typhimurium. Organism_taxid: 602. Strain: lt2.
(1)
1a
3gbxA01
A:40-279
1b
3gbxB01
B:40-279
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Aspartate Aminotransferase, domain 1
(355)
Homologous Superfamily
:
Aspartate Aminotransferase, domain 1
(354)
Salmonella typhimurium. Organism_taxid: 602. Strain: lt2.
(1)
2a
3gbxA02
A:281-417
2b
3gbxB02
B:281-417
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Pfam Domains
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Asymmetric Unit 1
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