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3G3Q
Asym. Unit
Info
Asym.Unit (108 KB)
Biol.Unit 1 (53 KB)
Biol.Unit 2 (53 KB)
Biol.Unit 3 (103 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A EUKARYOTIC POLYPHOSPHATE POLYMERASE IN COMPLEX WITH A PHOSPHATE POLYMER
Authors
:
M. Hothorn, K. Scheffzek
Date
:
02 Feb 09 (Deposition) - 05 May 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.64
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (1x)
Keywords
:
Polyphosphate Polymerase, Polyphosphate Kinase, Vtc Complex, Vacuolar Transporter Chaperone, Tunnel Enzyme, Membrane, Phosphoprotein, Transmembrane, Vacuole, Biosynthetic Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Hothorn, H. Neumann, E. D. Lenherr, M. Wehner, V. Rybin, P. O. Hassa, A. Uttenweiler, M. Reinhardt, A. Schmidt, J. Seiler, A. G. Ladurner, C. Herrmann, K. Scheffzek, A. Mayer
Catalytic Core Of A Membrane-Associated Eukaryotic Polyphosphate Polymerase.
Science V. 324 513 2009
[
close entry info
]
Hetero Components
(2, 32)
Info
All Hetero Components
1a: PHOSPHATE ION (PO4a)
1aa: PHOSPHATE ION (PO4aa)
1ab: PHOSPHATE ION (PO4ab)
1ac: PHOSPHATE ION (PO4ac)
1b: PHOSPHATE ION (PO4b)
1c: PHOSPHATE ION (PO4c)
1d: PHOSPHATE ION (PO4d)
1e: PHOSPHATE ION (PO4e)
1f: PHOSPHATE ION (PO4f)
1g: PHOSPHATE ION (PO4g)
1h: PHOSPHATE ION (PO4h)
1i: PHOSPHATE ION (PO4i)
1j: PHOSPHATE ION (PO4j)
1k: PHOSPHATE ION (PO4k)
1l: PHOSPHATE ION (PO4l)
1m: PHOSPHATE ION (PO4m)
1n: PHOSPHATE ION (PO4n)
1o: PHOSPHATE ION (PO4o)
1p: PHOSPHATE ION (PO4p)
1q: PHOSPHATE ION (PO4q)
1r: PHOSPHATE ION (PO4r)
1s: PHOSPHATE ION (PO4s)
1t: PHOSPHATE ION (PO4t)
1u: PHOSPHATE ION (PO4u)
1v: PHOSPHATE ION (PO4v)
1w: PHOSPHATE ION (PO4w)
1x: PHOSPHATE ION (PO4x)
1y: PHOSPHATE ION (PO4y)
1z: PHOSPHATE ION (PO4z)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
PO4
29
Ligand/Ion
PHOSPHATE ION
2
SO4
3
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(32, 32)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PO4 A:17 , HOH A:481 , PO4 B:13 , PO4 B:14 , PO4 B:16
BINDING SITE FOR RESIDUE PO4 A 15
02
AC2
SOFTWARE
PO4 A:15 , PO4 A:18 , LYS A:455 , PO4 B:16
BINDING SITE FOR RESIDUE PO4 A 17
03
AC3
SOFTWARE
PO4 A:17 , PO4 A:19 , LYS A:455 , PO4 B:16
BINDING SITE FOR RESIDUE PO4 A 18
04
AC4
SOFTWARE
PO4 A:18 , PO4 A:20 , PO4 A:21 , HIS A:283 , SER A:292
BINDING SITE FOR RESIDUE PO4 A 19
05
AC5
SOFTWARE
HOH A:8 , PO4 A:19 , PO4 A:21 , PO4 A:22 , ARG A:253 , LYS A:256 , HIS A:283 , SER A:292 , LYS A:455
BINDING SITE FOR RESIDUE PO4 A 20
06
AC6
SOFTWARE
PO4 A:19 , PO4 A:20 , PO4 A:22 , LYS A:200 , LYS A:281 , LYS A:455
BINDING SITE FOR RESIDUE PO4 A 21
07
AC7
SOFTWARE
PO4 A:20 , PO4 A:21 , PO4 A:23 , PO4 A:24 , LYS A:200 , ARG A:253 , LYS A:256 , LYS A:281 , PHE A:456
BINDING SITE FOR RESIDUE PO4 A 22
08
AC8
SOFTWARE
PO4 A:22 , PO4 A:24 , PO4 A:25 , TYR A:241 , ARG A:253 , ARG A:264 , LYS A:281 , SER A:457 , PHE A:459
BINDING SITE FOR RESIDUE PO4 A 23
09
AC9
SOFTWARE
PO4 A:22 , PO4 A:23 , PO4 A:25 , PO4 A:26 , LYS A:200 , TYR A:241 , PHE A:456 , SER A:457 , LYS A:458
BINDING SITE FOR RESIDUE PO4 A 24
10
BC1
SOFTWARE
PO4 A:23 , PO4 A:24 , PO4 A:26 , TYR A:241 , ARG A:264 , ARG A:266 , TYR A:359 , ARG A:361 , LYS A:458
BINDING SITE FOR RESIDUE PO4 A 25
11
BC2
SOFTWARE
PO4 A:24 , PO4 A:25 , PO4 A:27 , ARG A:264 , ARG A:266 , LYS A:281 , LYS A:294 , TYR A:359 , ARG A:361
BINDING SITE FOR RESIDUE PO4 A 26
12
BC3
SOFTWARE
PO4 A:26 , PO4 A:28 , LYS A:281 , LYS A:294 , ARG A:361 , GLU A:426 , LYS A:428
BINDING SITE FOR RESIDUE PO4 A 27
13
BC4
SOFTWARE
PO4 A:27 , PO4 A:29 , LYS A:294 , LYS A:428
BINDING SITE FOR RESIDUE PO4 A 28
14
BC5
SOFTWARE
PO4 A:28 , ARG A:373 , LYS A:428
BINDING SITE FOR RESIDUE PO4 A 29
15
BC6
SOFTWARE
THR A:273 , ASP A:274 , THR A:275
BINDING SITE FOR RESIDUE SO4 A 1
16
BC7
SOFTWARE
PO4 B:2 , PO4 B:3 , ARG B:373 , LYS B:428
BINDING SITE FOR RESIDUE PO4 B 1
17
BC8
SOFTWARE
PO4 B:1 , PO4 B:3 , LYS B:294
BINDING SITE FOR RESIDUE PO4 B 2
18
BC9
SOFTWARE
PO4 B:1 , PO4 B:2 , PO4 B:4 , PO4 B:5 , LYS B:294
BINDING SITE FOR RESIDUE PO4 B 3
19
CC1
SOFTWARE
PO4 B:3 , PO4 B:5 , LYS B:281 , LYS B:294 , GLU B:426 , LYS B:428
BINDING SITE FOR RESIDUE PO4 B 4
20
CC2
SOFTWARE
PO4 B:3 , PO4 B:4 , PO4 B:6 , PO4 B:7 , PO4 B:8 , ARG B:264 , ARG B:266 , LYS B:281 , LYS B:294 , ARG B:361
BINDING SITE FOR RESIDUE PO4 B 5
21
CC3
SOFTWARE
PO4 B:5 , PO4 B:7 , TYR B:241 , ARG B:264 , ARG B:266 , TYR B:359 , ARG B:361 , LYS B:458
BINDING SITE FOR RESIDUE PO4 B 6
22
CC4
SOFTWARE
PO4 B:5 , PO4 B:6 , PO4 B:8 , PO4 B:9 , LYS B:200 , LYS B:458
BINDING SITE FOR RESIDUE PO4 B 7
23
CC5
SOFTWARE
PO4 B:5 , PO4 B:7 , PO4 B:9 , TYR B:241 , ARG B:264 , LYS B:281 , SER B:457 , LYS B:458 , PHE B:459
BINDING SITE FOR RESIDUE PO4 B 8
24
CC6
SOFTWARE
PO4 B:7 , PO4 B:8 , PO4 B:10 , LYS B:200 , ARG B:253 , LYS B:281 , PHE B:456 , SER B:457
BINDING SITE FOR RESIDUE PO4 B 9
25
CC7
SOFTWARE
PO4 B:9 , PO4 B:11 , ARG B:253 , LYS B:256 , LYS B:281 , LYS B:455
BINDING SITE FOR RESIDUE PO4 B 10
26
CC8
SOFTWARE
PO4 B:10 , PO4 B:12 , HOH B:18 , LYS B:256 , HIS B:283 , SER B:292 , LYS B:455
BINDING SITE FOR RESIDUE PO4 B 11
27
CC9
SOFTWARE
PO4 B:11 , PO4 B:13 , HIS B:283 , SER B:292 , LYS B:455
BINDING SITE FOR RESIDUE PO4 B 12
28
DC1
SOFTWARE
PO4 A:15 , PO4 B:12 , PO4 B:14
BINDING SITE FOR RESIDUE PO4 B 13
29
DC2
SOFTWARE
PO4 A:15 , PO4 B:13 , PO4 B:16 , LYS B:455
BINDING SITE FOR RESIDUE PO4 B 14
30
DC3
SOFTWARE
PO4 A:15 , PO4 A:17 , PO4 A:18 , PO4 B:14 , HOH B:28
BINDING SITE FOR RESIDUE PO4 B 16
31
DC4
SOFTWARE
THR B:273 , ASP B:274 , THR B:275
BINDING SITE FOR RESIDUE SO4 B 481
32
DC5
SOFTWARE
HOH B:27 , LYS B:212 , TYR B:344 , LYS B:348
BINDING SITE FOR RESIDUE SO4 B 482
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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View:
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Sorry, no Info available
[
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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Sorry, no Info available
[
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Sorry, no Info available
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Pfam Domains
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