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3FZM
Asym. Unit
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Asym.Unit (90 KB)
Biol.Unit 1 (85 KB)
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(1)
Title
:
CRYSTAL STRUCTURES OF HSC70/BAG1 IN COMPLEX WITH SMALL MOLECULE INHIBITORS
Authors
:
P. Dokurno, D. S. Williamson, J. B. Murray, A. E. Surgenor
Date
:
26 Jan 09 (Deposition) - 17 Mar 09 (Release) - 31 Mar 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Hsp70, Hsc70, Bag1, Heat Shock, Chaperone, Protein Folding, Adenosine, Nucleotide, Nucleotide Exchange Factor, Small Molecule Inhibitor, Atp-Binding, Nucleotide-Binding, Stress Response, Apoptosis
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. S. Williamson, J. Borgognoni, A. Clay, Z. Daniels, P. Dokurno, M. J. Drysdale, N. Foloppe, G. L. Francis, C. J. Graham, R. Howes, A. T. Macias, J. B. Murray, R. Parsons, T. Shaw, A. E. Surgenor, L. Terry, Y. Wang, M. Wood, A. J. Massey
Novel Adenosine-Derived Inhibitors Of 70 Kda Heat Shock Protein, Discovered Through Structure-Based Design
J. Med. Chem. V. 52 1510 2009
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: 4-[[(2R,3S,4R,5R)-5-[6-AMINO-8-(QU... (3GOa)
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No.
Name
Count
Type
Full Name
1
3GO
1
Ligand/Ion
4-[[(2R,3S,4R,5R)-5-[6-AMINO-8-(QUINOLIN-6-YLMETHYLAMINO)PURIN-9-YL]-3,4-DIHYDROXY-OXOLAN-2-YL]METHOXYMETHYL]BENZONITRILE
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR A:15 , THR A:37 , GLY A:202 , GLY A:230 , GLU A:268 , LYS A:271 , ARG A:272 , SER A:275 , GLY A:339 , SER A:340 , ARG A:342 , ILE A:343 , ASP A:366 , HOH A:391 , HOH A:426 , HOH A:427 , HOH A:500 , HOH A:588
BINDING SITE FOR RESIDUE 3GO A 401
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_049619 (D32Y, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_049619
D
32
Y
HSP7C_HUMAN
Polymorphism
11551602
A
D
32
Y
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(4, 4)
Info
All PROSITE Patterns/Profiles
1: HSP70_1 (A:9-16)
2: HSP70_2 (A:197-210)
3: BAG (B:175-255)
4: HSP70_3 (A:334-348)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HSP70_1
PS00297
Heat shock hsp70 proteins family signature 1.
HSP7C_HUMAN
9-16
1
A:9-16
2
HSP70_2
PS00329
Heat shock hsp70 proteins family signature 2.
HSP7C_HUMAN
197-210
1
A:197-210
3
BAG
PS51035
BAG domain profile.
BAG1_HUMAN
246-326
1
B:175-255
4
HSP70_3
PS01036
Heat shock hsp70 proteins family signature 3.
HSP7C_HUMAN
334-348
1
A:334-348
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 3)
Info
All SCOP Domains
1a: SCOP_d3fzmb_ (B:)
2a: SCOP_d3fzma1 (A:5-188)
2b: SCOP_d3fzma2 (A:189-381)
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Protein Domains
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Organisms
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)
Class
:
All alpha proteins
(14657)
Fold
:
Spectrin repeat-like
(186)
Superfamily
:
BAG domain
(14)
Family
:
BAG domain
(14)
Protein domain
:
BAG-family molecular chaperon regulator-1, BAG1
(10)
Human (Homo sapiens) [TaxId: 9606]
(8)
1a
d3fzmb_
B:
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Ribonuclease H-like motif
(1424)
Superfamily
:
Actin-like ATPase domain
(426)
Family
:
automated matches
(111)
Protein domain
:
automated matches
(111)
Human (Homo sapiens) [TaxId: 9606]
(38)
2a
d3fzma1
A:5-188
2b
d3fzma2
A:189-381
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CATH Domains
(4, 5)
Info
all CATH domains
1a: CATH_3fzmA02 (A:68-122)
2a: CATH_3fzmA01 (A:5-67,A:123-187,A:361-381)
2b: CATH_3fzmA03 (A:188-228,A:313-360)
3a: CATH_3fzmA04 (A:229-312)
4a: CATH_3fzmB00 (B:150-260)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Defensin A-like
(149)
Homologous Superfamily
:
[code=3.30.30.30, no name defined]
(60)
Human (Homo sapiens)
(15)
1a
3fzmA02
A:68-122
Topology
:
Nucleotidyltransferase; domain 5
(788)
Homologous Superfamily
:
[code=3.30.420.40, no name defined]
(217)
Human (Homo sapiens)
(36)
2a
3fzmA01
A:5-67,A:123-187,A:361-381
2b
3fzmA03
A:188-228,A:313-360
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Actin; Chain A, domain 4
(156)
Homologous Superfamily
:
Actin; Chain A, domain 4
(155)
Human (Homo sapiens)
(29)
3a
3fzmA04
A:229-312
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Methane Monooxygenase Hydroxylase; Chain G, domain 1
(192)
Homologous Superfamily
:
[code=1.20.58.120, no name defined]
(13)
Human (Homo sapiens)
(8)
4a
3fzmB00
B:150-260
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Pfam Domains
(0, 0)
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