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3FX4
Asym. Unit
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Asym.Unit (67 KB)
Biol.Unit 1 (62 KB)
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(1)
Title
:
PORCINE ALDEHYDE REDUCTASE IN TERNARY COMPLEX WITH INHIBITOR
Authors
:
V. Carbone, O. El-Kabbani
Date
:
20 Jan 09 (Deposition) - 22 Dec 09 (Release) - 29 Dec 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.99
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Tim Barrel, Aldo-Keto Reductase, Ternary Complex, Acetylation, Nadp, Oxidoreductase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
V. Carbone, O. El-Kabbani
Structure Of Aldehyde Reductase In Ternary Complex With A 5-Arylidene-2, 4-Thiazolidinedione Aldose Reductase Inhibitor
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(3, 5)
Info
All Hetero Components
1a: [(5Z)-5-{[3-(CARBOXYMETHOXY)-4-MET... (FX4a)
2a: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPa)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
View:
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No.
Name
Count
Type
Full Name
1
FX4
1
Ligand/Ion
[(5Z)-5-{[3-(CARBOXYMETHOXY)-4-METHOXYPHENYL]METHYLIDENE}-2,4-DIOXO-1,3-THIAZOLIDIN-3-YL]ACETIC ACID
2
NAP
1
Ligand/Ion
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
3
SO4
3
Ligand/Ion
SULFATE ION
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:251 , LYS A:257 , PHE A:277 , HOH A:442 , HOH A:492 , HOH A:538 , HOH A:553
BINDING SITE FOR RESIDUE SO4 A 361
2
AC2
SOFTWARE
ARG A:167 , GLN A:275 , ASP A:278 , HOH A:329 , HOH A:517 , HOH A:575
BINDING SITE FOR RESIDUE SO4 A 362
3
AC3
SOFTWARE
HIS A:9 , LEU A:173 , SER A:174 , VAL A:175 , ALA A:176 , ARG A:179
BINDING SITE FOR RESIDUE SO4 A 363
4
AC4
SOFTWARE
GLY A:20 , THR A:21 , TRP A:22 , ASP A:45 , TYR A:50 , HIS A:113 , SER A:162 , ASN A:163 , GLN A:184 , TYR A:210 , SER A:211 , PRO A:212 , LEU A:213 , GLY A:214 , SER A:215 , ASP A:217 , ALA A:246 , ILE A:261 , PRO A:262 , LYS A:263 , SER A:264 , VAL A:265 , THR A:266 , ARG A:269 , GLN A:272 , ASN A:273 , HOH A:393 , FX4 A:401 , HOH A:415 , HOH A:435 , HOH A:452 , HOH A:453 , HOH A:528 , HOH A:586 , HOH A:635
BINDING SITE FOR RESIDUE NAP A 350
5
AC5
SOFTWARE
TRP A:22 , ILE A:49 , TYR A:50 , HIS A:113 , ARG A:218 , ALA A:219 , PHE A:298 , ILE A:299 , VAL A:300 , MET A:302 , NAP A:350 , HOH A:377 , HOH A:607
BINDING SITE FOR RESIDUE FX4 A 401
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_AK1A1_PIG_001 (S165N, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_AK1A1_PIG_001
*
S
165
N
AK1A1_PIG
---
---
A
S
165
N
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: ALDOKETO_REDUCTASE_1 (A:40-57)
2: ALDOKETO_REDUCTASE_2 (A:147-164)
3: ALDOKETO_REDUCTASE_3 (A:261-276)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ALDOKETO_REDUCTASE_1
PS00798
Aldo/keto reductase family signature 1.
AK1A1_PIG
40-57
1
A:40-57
2
ALDOKETO_REDUCTASE_2
PS00062
Aldo/keto reductase family signature 2.
AK1A1_PIG
147-164
1
A:147-164
3
ALDOKETO_REDUCTASE_3
PS00063
Aldo/keto reductase family putative active site signature.
AK1A1_PIG
261-276
1
A:261-276
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Exons
(0, 0)
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All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3fx4a_ (A:)
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Protein Domains
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
NAD(P)-linked oxidoreductase
(286)
Family
:
Aldo-keto reductases (NADP)
(251)
Protein domain
:
Aldose reductase (aldehyde reductase)
(107)
Pig (Sus scrofa) [TaxId: 9823]
(11)
1a
d3fx4a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_3fx4A00 (A:1-325)
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Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
NADP-dependent oxidoreductase
(181)
Pig (Sus scrofa)
(7)
1a
3fx4A00
A:1-325
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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