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3FUX
Biol. Unit 3
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Asym.Unit (148 KB)
Biol.Unit 1 (50 KB)
Biol.Unit 2 (48 KB)
Biol.Unit 3 (49 KB)
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(1)
Title
:
T. THERMOPHILUS 16S RRNA A1518 AND A1519 METHYLTRANSFERASE (KSGA) IN COMPLEX WITH 5'-METHYLTHIOADENOSINE IN SPACE GROUP P212121
Authors
:
H. Demirci, R. Belardinelli, E. Seri, S. T. Gregory, C. Gualerzi, A. E. D G. Jogl
Date
:
14 Jan 09 (Deposition) - 31 Mar 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.68
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Keywords
:
Methyltransferase, Dimethyltransferase, Dual-Specific Methyltransferase, 16S Rrna Methyltransferase, Translation, Antibiotic Resistance, Rna-Binding, Rrna Processing, S-Adenosyl-L- Methionine, Transferase
(Keyword Search:
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Reference
:
H. Demirci, R. Belardinelli, E. Seri, S. T. Gregory, C. Gualerzi, A. E. Dahlberg, G. Jogl
Structural Rearrangements In The Active Site Of The Thermus Thermophilus 16S Rrna Methyltransferase Ksga In A Binary Complex With 5'-Methylthioadenosine.
J. Mol. Biol. V. 388 271 2009
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: 5'-DEOXY-5'-METHYLTHIOADENOSINE (MTAa)
1b: 5'-DEOXY-5'-METHYLTHIOADENOSINE (MTAb)
1c: 5'-DEOXY-5'-METHYLTHIOADENOSINE (MTAc)
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No.
Name
Count
Type
Full Name
1
MTA
1
Ligand/Ion
5'-DEOXY-5'-METHYLTHIOADENOSINE
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Sites
(1, 1)
Info
All Sites
1: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC3
SOFTWARE
PHE C:25 , GLY C:26 , GLN C:27 , ASN C:28 , GLY C:54 , GLY C:56 , ILE C:74 , GLU C:75 , LYS C:76 , ASP C:99 , ALA C:100 , ASN C:117 , PRO C:119 , HIS C:121 , HOH C:403
BINDING SITE FOR RESIDUE MTA C 272
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: SAM_RNA_A_N6_MT (C:21-268)
2: RRNA_A_DIMETH (C:50-77)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SAM_RNA_A_N6_MT
PS51689
rRNA adenine N(6)-methyltransferase family profile.
RSMA_THET8
21-271
1
-
-
C:21-268
2
RRNA_A_DIMETH
PS01131
Ribosomal RNA adenine dimethylases signature.
RSMA_THET8
50-77
1
-
-
C:50-77
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Exons
(0, 0)
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SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d3fuxa_ (A:)
1b: SCOP_d3fuxb_ (B:)
1c: SCOP_d3fuxc_ (C:)
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Organisms
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
S-adenosyl-L-methionine-dependent methyltransferases
(533)
Superfamily
:
S-adenosyl-L-methionine-dependent methyltransferases
(533)
Family
:
automated matches
(94)
Protein domain
:
automated matches
(94)
Thermus thermophilus HB8 [TaxId: 300852]
(5)
1a
d3fuxa_
A:
1b
d3fuxb_
B:
1c
d3fuxc_
C:
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CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_3fuxC01 (C:4-203)
1b: CATH_3fuxA01 (A:5-203)
1c: CATH_3fuxB01 (B:5-203)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
Vaccinia Virus protein VP39
(378)
Thermus thermophilus hb8. Organism_taxid: 300852. Strain: hb8.
(7)
1a
3fuxC01
C:4-203
1b
3fuxA01
A:5-203
1c
3fuxB01
B:5-203
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Pfam Domains
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Asym.Unit (148 KB)
Header - Asym.Unit
Biol.Unit 1 (50 KB)
Header - Biol.Unit 1
Biol.Unit 2 (48 KB)
Header - Biol.Unit 2
Biol.Unit 3 (49 KB)
Header - Biol.Unit 3
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