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3FUP
Biol. Unit 1
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Asym.Unit (108 KB)
Biol.Unit 1 (52 KB)
Biol.Unit 2 (53 KB)
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(1)
Title
:
CRYSTAL STRUCTURES OF JAK1 AND JAK2 INHIBITOR COMPLEXES
Authors
:
N. K. Williams, R. S. Bamert, O. Patel, E. Fantino, J. Rossjohn, I. S. Lucet
Date
:
14 Jan 09 (Deposition) - 10 Feb 09 (Release) - 05 May 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Kinase, Ptk Domain, Protein-Inhibitor Complex, Atp-Binding, Chromosomal Rearrangement, Disease Mutation, Membrane, Nucleotide-Binding, Phosphoprotein, Polymorphism, Proto- Oncogene, Sh2 Domain, Transferase, Tyrosine-Protein Kinase
(Keyword Search:
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)
Reference
:
N. K. Williams, R. S. Bamert, O. Patel, C. Wang, P. M. Walden, A. F. Wilks, E. Fantino, J. Rossjohn, I. S. Lucet
Dissecting Specificity In The Janus Kinases: The Structures Of Jak-Specific Inhibitors Complexed To The Jak1 And Jak2 Protein Tyrosine Kinase Domains.
J. Mol. Biol. V. 387 219 2009
(for further references see the
PDB file header
)
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: 3-{(3R,4R)-4-METHYL-3-[METHYL(7H-P... (MI1a)
1b: 3-{(3R,4R)-4-METHYL-3-[METHYL(7H-P... (MI1b)
2a: O-PHOSPHOTYROSINE (PTRa)
2b: O-PHOSPHOTYROSINE (PTRb)
2c: O-PHOSPHOTYROSINE (PTRc)
2d: O-PHOSPHOTYROSINE (PTRd)
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No.
Name
Count
Type
Full Name
1
MI1
1
Ligand/Ion
3-{(3R,4R)-4-METHYL-3-[METHYL(7H-PYRROLO[2,3-D]PYRIMIDIN-4-YL)AMINO]PIPERIDIN-1-YL}-3-OXOPROPANENITRILE
2
PTR
2
Mod. Amino Acid
O-PHOSPHOTYROSINE
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Sites
(1, 1)
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All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:3 , LEU A:855 , GLY A:856 , LYS A:857 , GLY A:858 , GLY A:861 , VAL A:863 , ALA A:880 , GLU A:930 , TYR A:931 , LEU A:932 , ARG A:980 , LEU A:983 , GLY A:993 , ASP A:994
BINDING SITE FOR RESIDUE MI1 A 1
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_041721 (R1063H, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_041721
R
1063
H
JAK2_HUMAN
Polymorphism
41316003
A
R
1063
H
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:855-883)
2: PROTEIN_KINASE_TYR (A:972-984)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
JAK2_HUMAN
855-883
1
A:855-883
-
2
PROTEIN_KINASE_TYR
PS00109
Tyrosine protein kinases specific active-site signature.
JAK2_HUMAN
972-984
1
A:972-984
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3fupa_ (A:)
1b: SCOP_d3fupb_ (B:)
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
automated matches
(529)
Protein domain
:
automated matches
(529)
Human (Homo sapiens) [TaxId: 9606]
(438)
1a
d3fupa_
A:
1b
d3fupb_
B:
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_3fupB01 (B:840-931)
1b: CATH_3fupA01 (A:843-931)
2a: CATH_3fupA02 (A:932-1128)
2b: CATH_3fupB02 (B:932-1128)
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
3fupB01
B:840-931
1b
3fupA01
A:843-931
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
2a
3fupA02
A:932-1128
2b
3fupB02
B:932-1128
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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