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3FNL
Asym. Unit
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Asym.Unit (115 KB)
Biol.Unit 1 (108 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE COMPLEX OF BUFFALO LACTOPEROXIDASE WITH SALICYLHYDROXAMIC ACID AT 2.48 A RESOLUTION
Authors
:
I. A. Sheikh, G. Vikram, N. Singh, M. Sinha, A. Bhushan, S. Sharma, P. Kau T. P. Singh
Date
:
25 Dec 08 (Deposition) - 27 Jan 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.48
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Lactoperoxidase, Buffalo, Salicylhydroxamic Acid, Peroxidase, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
I. A. Sheikh, G. Vikram, N. Singh, M. Sinha, A. Bhushan, S. Sharma, P. Kaur, T. P. Singh
Crystal Structure Of The Complex Of Buffalo Lactoperoxidase With Salicylhydroxamic Acid At 2. 48 A Resolution
To Be Published
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Hetero Components
(8, 23)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
2a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
3a: IODIDE ION (IODa)
3b: IODIDE ION (IODb)
3c: IODIDE ION (IODc)
3d: IODIDE ION (IODd)
3e: IODIDE ION (IODe)
3f: IODIDE ION (IODf)
3g: IODIDE ION (IODg)
3h: IODIDE ION (IODh)
4a: ALPHA-D-MANNOSE (MANa)
4b: ALPHA-D-MANNOSE (MANb)
5a: N-ACETYL-D-GLUCOSAMINE (NAGa)
5b: N-ACETYL-D-GLUCOSAMINE (NAGb)
5c: N-ACETYL-D-GLUCOSAMINE (NAGc)
5d: N-ACETYL-D-GLUCOSAMINE (NAGd)
5e: N-ACETYL-D-GLUCOSAMINE (NAGe)
5f: N-ACETYL-D-GLUCOSAMINE (NAGf)
5g: N-ACETYL-D-GLUCOSAMINE (NAGg)
5h: N-ACETYL-D-GLUCOSAMINE (NAGh)
6a: THIOCYANATE ION (SCNa)
7a: PHOSPHOSERINE (SEPa)
8a: SALICYLHYDROXAMIC ACID (SHAa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
1
Ligand/Ion
CALCIUM ION
2
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
3
IOD
8
Ligand/Ion
IODIDE ION
4
MAN
2
Ligand/Ion
ALPHA-D-MANNOSE
5
NAG
8
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
6
SCN
1
Ligand/Ion
THIOCYANATE ION
7
SEP
1
Mod. Amino Acid
PHOSPHOSERINE
8
SHA
1
Ligand/Ion
SALICYLHYDROXAMIC ACID
[
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Sites
(22, 22)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:95 , ARG A:504 , NAG A:597
BINDING SITE FOR RESIDUE NAG A 596
02
AC2
SOFTWARE
ARG A:504 , NAG A:596 , MAN A:598
BINDING SITE FOR RESIDUE NAG A 597
03
AC3
SOFTWARE
NAG A:597 , HOH A:735
BINDING SITE FOR RESIDUE MAN A 598
04
AC4
SOFTWARE
ASN A:205 , SER A:208 , ALA A:214 , VAL A:215 , GLN A:217 , NAG A:600 , HOH A:921
BINDING SITE FOR RESIDUE NAG A 599
05
AC5
SOFTWARE
NAG A:599 , HOH A:916 , HOH A:927
BINDING SITE FOR RESIDUE NAG A 600
06
AC6
SOFTWARE
ASN A:241 , ALA A:244 , TRP A:384 , LYS A:388 , NAG A:602
BINDING SITE FOR RESIDUE NAG A 601
07
AC7
SOFTWARE
NAG A:601 , MAN A:603 , HOH A:917
BINDING SITE FOR RESIDUE NAG A 602
08
AC8
SOFTWARE
NAG A:602
BINDING SITE FOR RESIDUE MAN A 603
09
AC9
SOFTWARE
ASN A:332 , VAL A:335 , NAG A:605 , HOH A:809
BINDING SITE FOR RESIDUE NAG A 604
10
BC1
SOFTWARE
NAG A:604
BINDING SITE FOR RESIDUE NAG A 605
11
BC2
SOFTWARE
ASP A:110 , THR A:184 , PHE A:186 , ASP A:188 , SER A:190
BINDING SITE FOR RESIDUE CA A 606
12
BC3
SOFTWARE
PHE A:309 , TRP A:530
BINDING SITE FOR RESIDUE IOD A 607
13
BC4
SOFTWARE
ASN A:80
BINDING SITE FOR RESIDUE IOD A 608
14
BC5
SOFTWARE
HIS A:565 , ALA A:566 , PHE A:567
BINDING SITE FOR RESIDUE IOD A 609
15
BC6
SOFTWARE
GLU A:363 , ARG A:397
BINDING SITE FOR RESIDUE IOD A 610
16
BC7
SOFTWARE
TRP A:46 , VAL A:342 , TRP A:452
BINDING SITE FOR RESIDUE IOD A 611
17
BC8
SOFTWARE
LYS A:462 , THR A:463
BINDING SITE FOR RESIDUE IOD A 612
18
BC9
SOFTWARE
PHE A:229
BINDING SITE FOR RESIDUE IOD A 613
19
CC1
SOFTWARE
ARG A:504
BINDING SITE FOR RESIDUE IOD A 614
20
CC2
SOFTWARE
MET A:101 , GLY A:104 , GLN A:105 , ASP A:108 , ASP A:112 , PHE A:113 , ALA A:114 , GLU A:258 , THR A:344 , PHE A:347 , ARG A:348 , GLY A:350 , HIS A:351 , VAL A:354 , LEU A:417 , ILE A:436 , ARG A:440 , SHA A:617 , HOH A:664 , HOH A:673 , HOH A:864
BINDING SITE FOR RESIDUE HEM A 615
21
CC3
SOFTWARE
ARG A:202
BINDING SITE FOR RESIDUE SCN A 616
22
CC4
SOFTWARE
GLN A:105 , HIS A:109 , ARG A:255 , GLU A:258 , HEM A:615 , HOH A:673
BINDING SITE FOR RESIDUE SHA A 617
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PEROXIDASE_3 (A:12-594)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PEROXIDASE_3
PS50292
Animal heme peroxidase superfamily profile.
PERL_BUBBU
129-711
1
A:12-594
[
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Sorry, no Info available
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Pfam Domains
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Sorry, no Info available
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Protein & NOT Site
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Chain A
Asymmetric Unit 1
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Asym.Unit (115 KB)
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