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3FLG
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Biol.Unit 1 (25 KB)
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(1)
Title
:
THE PWWP DOMAIN OF HUMAN DNA (CYTOSINE-5-)-METHYLTRANSFERASE 3 BETA
Authors
:
M. F. Amaya, H. Zeng, F. Mackenzie, J. Weigelt, M. Sundstrom, C. H. Arrowsmith, A. M. Edwards, A. Botchkarev, J. Min, H. Wu, Structural Genomics Consortium (Sgc)
Date
:
18 Dec 08 (Deposition) - 31 Mar 09 (Release) - 25 Aug 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Dnmt3B, Pwwp Domain, Methyltransferase 3 Beta, Structural Genomics, Structural Genomics Consortium, Sgc, Alternative Splicing, Disease Mutation, Dna-Binding, Metal-Binding, Methyltransferase, Nucleus, Polymorphism, S-Adenosyl-L- Methionine, Transferase, Ubl Conjugation, Zinc, Zinc-Finger
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Zeng, M. F. Amaya, F. Mackenzie, J. Weigelt, M. Sundstrom, C. H. Arrowsmith, A. M. Edwards, J. Min, H. Wu
Crystal Structure Of The Pwwp Domain Of Human Dna (Cytosine-5-)-Methyltransferase 3 Beta
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
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SAPs(SNPs)/Variants
(1, 1)
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1: VAR_022579 (S66P, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_022579
S
270
P
DNM3B_HUMAN
Disease (ICF1)
121908947
A
S
66
P
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
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1: PWWP (A:21-79)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PWWP
PS50812
PWWP domain profile.
DNM3B_HUMAN
225-283
1
A:21-79
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Exons
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SCOP Domains
(1, 1)
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1a: SCOP_d3flga_ (A:)
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Class
:
All beta proteins
(24004)
Fold
:
SH3-like barrel
(1035)
Superfamily
:
Tudor/PWWP/MBT
(72)
Family
:
PWWP domain
(14)
Protein domain
:
DNA methyltransferase DNMT3B
(2)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d3flga_
A:
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CATH Domains
(2, 2)
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all CATH domains
1a: CATH_3flgA02 (A:77-145)
2a: CATH_3flgA01 (A:12-76)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1
(23)
Homologous Superfamily
:
PWWP, helical domain
(2)
Human (Homo sapiens)
(1)
1a
3flgA02
A:77-145
Class
:
Mainly Beta
(13760)
Architecture
:
Roll
(1513)
Topology
:
SH3 type barrels.
(648)
Homologous Superfamily
:
[code=2.30.30.160, no name defined]
(35)
Human (Homo sapiens)
(27)
2a
3flgA01
A:12-76
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