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Asym. Unit
Info
Asym.Unit (417 KB)
Biol.Unit 1 (209 KB)
Biol.Unit 2 (207 KB)
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(1)
Title
:
DOMAIN ORGANIZATION IN CLOSTRIDIUM BUTULINUM NEUROTOXIN TYPE E IS UNIQUE: ITS IMPLICATION IN FASTER TRANSLOCATION
Authors
:
D. Kumaran, S. Eswaramoorthy, S. Swaminathan
Date
:
04 Dec 08 (Deposition) - 16 Dec 08 (Release) - 14 Apr 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.65
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Botulinum Neurotoxin Serotype E, Botulism, Domain Organization, Endopeptidase, Translocation, Hydrolase, Membrane, Metal-Binding, Metalloprotease, Neurotoxin, Protease, Secreted, Toxin, Transmembrane, Zinc
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
D. Kumaran, S. Eswaramoorthy, W. Furey, J. Navaza, M. Sax, S. Swaminathan
Domain Organization In Clostridium Botulinum Neurotoxin Type E Is Unique: Its Implication In Faster Translocation.
J. Mol. Biol. V. 386 233 2009
(for further references see the
PDB file header
)
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Hetero Components
(3, 7)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: SODIUM ION (NAa)
2b: SODIUM ION (NAb)
2c: SODIUM ION (NAc)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
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No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
NA
3
Ligand/Ion
SODIUM ION
3
ZN
2
Ligand/Ion
ZINC ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:212 , HIS A:216 , GLU A:251 , HOH A:1289 , HOH A:1318
BINDING SITE FOR RESIDUE ZN A1300
2
AC2
SOFTWARE
ALA A:544 , GLU A:547 , GLN A:548 , LYS A:550 , HOH A:1317
BINDING SITE FOR RESIDUE NA A1301
3
AC3
SOFTWARE
VAL A:593 , ILE A:596 , ALA A:597 , ILE A:599 , HOH A:1314
BINDING SITE FOR RESIDUE NA A1302
4
AC4
SOFTWARE
TYR A:879 , TYR A:1041
BINDING SITE FOR RESIDUE ACT A1303
5
AC5
SOFTWARE
HIS B:212 , HIS B:216 , GLU B:251 , HOH B:1275 , HOH B:1284
BINDING SITE FOR RESIDUE ZN B1300
6
AC6
SOFTWARE
VAL B:593 , ILE B:596 , ILE B:599 , SER B:600 , HOH B:1283
BINDING SITE FOR RESIDUE NA B1302
7
AC7
SOFTWARE
TYR B:879 , TYR B:881
BINDING SITE FOR RESIDUE ACT B1303
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 2)
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1: ZINC_PROTEASE (A:209-218,B:209-218)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZINC_PROTEASE
PS00142
Neutral zinc metallopeptidases, zinc-binding region signature.
BXE_CLOBO
209-218
2
A:209-218
B:209-218
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Exons
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (417 KB)
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