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3FBM
Asym. Unit
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Asym.Unit (74 KB)
Biol.Unit 1, α-C (3.7 MB)
Biol.Unit 1 (3.7 MB)
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(1)
Title
:
D431N MUTANT VP2 PROTEIN OF INFECTIOUS BURSAL DISEASE VIRUS; DERIVED T=1 PARTICLES
Authors
:
N. Irigoyen, D. Garriga, A. Navarro, N. Verdaguer, J. F. Rodriguez, J. R
Date
:
19 Nov 08 (Deposition) - 13 Jan 09 (Release) - 30 May 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.10
Chains
:
Asym. Unit : A
Biol. Unit 1: A (60x)
Keywords
:
Capsid Protein, Autoproteolytic Activity, Capsid Maturation, Virus Assembly, Ibdv, Virus
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Irigoyen, D. Garriga, A. Navarro, N. Verdaguer, J. F. Rodriguez, J. R. Caston
Autoproteolytic Activity Derived From The Infectious Bursal Disease Virus Capsid Protein
J. Biol. Chem. V. 284 8064 2009
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
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No.
Name
Count
Type
Full Name
1
CA
1
Ligand/Ion
CALCIUM ION
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(10, 10)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_POLS_IBDV_001 (Y80L, chain A, )
02: VAR_POLS_IBDV_002 (H253Q, chain A, )
03: VAR_POLS_IBDV_003 (L263F, chain A, )
04: VAR_POLS_IBDV_004 (T270T, chain A, )
05: VAR_POLS_IBDV_005 (N279D, chain A, )
06: VAR_POLS_IBDV_006 (T284A, chain A, )
07: VAR_POLS_IBDV_007 (M290M, chain A, )
08: VAR_POLS_IBDV_008 (I312V, chain A, )
09: VAR_POLS_IBDV_009 (R330S, chain A, )
10: VAR_POLS_IBDV_010 (G409A, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_POLS_IBDV_001
*
Y
80
L
POLS_IBDV
---
---
A
Y
80
L
02
UniProt
VAR_POLS_IBDV_002
*
H
253
Q
POLS_IBDV
---
---
A
H
253
Q
03
UniProt
VAR_POLS_IBDV_003
*
L
263
F
POLS_IBDV
---
---
A
L
263
F
04
UniProt
VAR_POLS_IBDV_004
*
A
270
T
POLS_IBDV
---
---
A
T
270
T
05
UniProt
VAR_POLS_IBDV_005
*
N
279
D
POLS_IBDV
---
---
A
N
279
D
06
UniProt
VAR_POLS_IBDV_006
*
T
284
A
POLS_IBDV
---
---
A
T
284
A
07
UniProt
VAR_POLS_IBDV_007
*
L
290
M
POLS_IBDV
---
---
A
M
290
M
08
UniProt
VAR_POLS_IBDV_008
*
I
312
V
POLS_IBDV
---
---
A
I
312
V
09
UniProt
VAR_POLS_IBDV_009
*
R
330
S
POLS_IBDV
---
---
A
R
330
S
10
UniProt
VAR_POLS_IBDV_010
*
G
409
A
POLS_IBDV
---
---
A
G
409
A
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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Exons
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SCOP Domains
(1, 1)
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1a: SCOP_d3fbma_ (A:)
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Class
:
All beta proteins
(24004)
Fold
:
Nucleoplasmin-like/VP (viral coat and capsid proteins)
(278)
Superfamily
:
Positive stranded ssRNA viruses
(163)
Family
:
Birnaviridae-like VP
(6)
Protein domain
:
automated matches
(3)
Avian infectious bursal disease virus [TaxId: 10995]
(1)
1a
d3fbma_
A:
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CATH Domains
(0, 0)
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (74 KB)
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