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3F53
Asym. Unit
Info
Asym.Unit (49 KB)
Biol.Unit 1 (43 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF TOXOPLASMA GONDII MICRONEMAL PROTEIN 1 BOUND TO 2F-3'SIALACNAC
Authors
:
J. A. Garnett
Date
:
03 Nov 08 (Deposition) - 28 Jul 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Cell Adhesion, Micronemal Protein, Carbohydrate, Fluorine, Toxoplasma Gondii, Cytoplasmic Vesicle, Lectin, Virulence
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. A. Garnett, Y. Liu, E. Leon, S. A. Allman, N. Friedrich, S. Saouros, S. Curry, D. Soldati-Favre, B. G. Davis, T. Feizi, S. Matthews
Detailed Insights From Microarray And Crystallographic Studies Into Carbohydrate Recognition By Microneme Protein (Mic1) Of Toxoplasma Gondii.
Protein Sci. V. 18 1935 2009
(for further references see the
PDB file header
)
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Hetero Components
(6, 18)
Info
All Hetero Components
1a: 2-FLUORO-2-DEOXY-BETA-D-GALACTOPYR... (2FGa)
2a: ACETATE ION (ACTa)
2b: ACETATE ION (ACTb)
2c: ACETATE ION (ACTc)
2d: ACETATE ION (ACTd)
2e: ACETATE ION (ACTe)
2f: ACETATE ION (ACTf)
2g: ACETATE ION (ACTg)
2h: ACETATE ION (ACTh)
3a: CHLORIDE ION (CLa)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
4d: GLYCEROL (GOLd)
4e: GLYCEROL (GOLe)
5a: SELENOMETHIONINE (MSEa)
5b: SELENOMETHIONINE (MSEb)
6a: O-SIALIC ACID (SIAa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
2FG
1
Ligand/Ion
2-FLUORO-2-DEOXY-BETA-D-GALACTOPYRANOSE
2
ACT
8
Ligand/Ion
ACETATE ION
3
CL
1
Ligand/Ion
CHLORIDE ION
4
GOL
5
Ligand/Ion
GLYCEROL
5
MSE
2
Mod. Amino Acid
SELENOMETHIONINE
6
SIA
1
Ligand/Ion
O-SIALIC ACID
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:17 , ASP A:89 , ASP A:90 , CYS A:187 , GOL A:601
BINDING SITE FOR RESIDUE CL A 301
02
AC2
SOFTWARE
LYS A:200 , HIS A:202 , TYR A:203 , THR A:204 , GLN A:242 , 2FG A:402 , HOH A:1145 , HOH A:1170
BINDING SITE FOR RESIDUE SIA A 401
03
AC3
SOFTWARE
GLN A:242 , SIA A:401 , HOH A:1170
BINDING SITE FOR RESIDUE 2FG A 402
04
AC4
SOFTWARE
ASN A:86 , THR A:94 , LYS A:166
BINDING SITE FOR RESIDUE ACT A 501
05
AC5
SOFTWARE
MSE A:24 , ARG A:28 , HOH A:1038 , HOH A:1043
BINDING SITE FOR RESIDUE ACT A 502
06
AC6
SOFTWARE
PRO A:47 , SER A:48 , SER A:49 , ACT A:507 , HOH A:1133 , HOH A:1151 , HOH A:1155
BINDING SITE FOR RESIDUE ACT A 503
07
AC7
SOFTWARE
GLN A:62 , HIS A:108 , ALA A:109 , THR A:110 , ARG A:111
BINDING SITE FOR RESIDUE ACT A 504
08
AC8
SOFTWARE
PRO A:96 , CYS A:97 , PRO A:98 , LEU A:170 , TYR A:171 , SER A:172
BINDING SITE FOR RESIDUE ACT A 505
09
AC9
SOFTWARE
LYS A:43 , SER A:106 , ASN A:107 , HIS A:108
BINDING SITE FOR RESIDUE ACT A 506
10
BC1
SOFTWARE
PRO A:47 , SER A:48 , TRP A:161 , GLU A:176 , CYS A:177 , GLY A:182 , THR A:183 , THR A:184 , ACT A:503
BINDING SITE FOR RESIDUE ACT A 507
11
BC2
SOFTWARE
ARG A:19 , HOH A:1002 , HOH A:1034 , HOH A:1165
BINDING SITE FOR RESIDUE ACT A 508
12
BC3
SOFTWARE
SER A:17 , ASP A:90 , CYS A:91 , PHE A:126 , SER A:128 , TRP A:185 , CYS A:187 , ASP A:230 , CL A:301 , HOH A:1147 , HOH A:1148
BINDING SITE FOR RESIDUE GOL A 601
13
BC4
SOFTWARE
TYR A:20 , ASN A:155 , ASN A:156 , ASP A:230 , GLU A:231 , ILE A:243
BINDING SITE FOR RESIDUE GOL A 602
14
BC5
SOFTWARE
ALA A:16 , GLU A:31 , GLU A:35 , TYR A:186 , HOH A:1152
BINDING SITE FOR RESIDUE GOL A 603
15
BC6
SOFTWARE
HIS A:93 , THR A:94 , ASN A:139 , LYS A:166 , GOL A:605
BINDING SITE FOR RESIDUE GOL A 604
16
BC7
SOFTWARE
CYS A:91 , GLY A:92 , GOL A:604
BINDING SITE FOR RESIDUE GOL A 605
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (49 KB)
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