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3F2L
Asym. Unit
Info
Asym.Unit (72 KB)
Biol.Unit 1 (68 KB)
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(1)
Title
:
CRYSTAL STRUCTURE ANALYSIS OF THE K171A MUTATION OF N-TERMINAL TYPE II COHESIN 1 FROM THE CELLULOSOMAL SCAB SUBUNIT OF ACETIVIBRIO CELLULOLYTICUS
Authors
:
F. Frolow, A. Freeman, Y. Wine, A. Eppel, M. Shanzer, S. Stempler
Date
:
30 Oct 08 (Deposition) - 02 Dec 08 (Release) - 02 Dec 08 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.85
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Point Mutation, Structural Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Frolow, A. Freeman, Y. Wine, A. Eppel, M. Shanzer, S. Stempler
Crystal Structure Analysis Of The K171A Mutation Of N-Terminal Type Ii Cohesin 1 From The Cellulosomal Scab Subunit Of Acetivibrio Cellulolyticus
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(3, 20)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
2a: AMMONIUM ION (NH4a)
2b: AMMONIUM ION (NH4b)
2c: AMMONIUM ION (NH4c)
2d: AMMONIUM ION (NH4d)
2e: AMMONIUM ION (NH4e)
2f: AMMONIUM ION (NH4f)
2g: AMMONIUM ION (NH4g)
2h: AMMONIUM ION (NH4h)
3a: NITRATE ION (NO3a)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
11
Ligand/Ion
1,2-ETHANEDIOL
2
NH4
8
Ligand/Ion
AMMONIUM ION
3
NO3
1
Ligand/Ion
NITRATE ION
[
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Sites
(20, 20)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:55 , VAL A:56 , ALA A:57 , THR A:110 , HOH A:283
BINDING SITE FOR RESIDUE EDO A 176
02
AC2
SOFTWARE
ASP A:73 , PHE A:74 , ASP A:100 , NH4 A:190 , HOH A:422
BINDING SITE FOR RESIDUE EDO A 177
03
AC3
SOFTWARE
PRO A:45 , ASN A:71 , LEU A:121 , HOH A:246
BINDING SITE FOR RESIDUE EDO A 178
04
AC4
SOFTWARE
ASN A:75 , ILE A:140 , ASP A:141 , SER A:158 , VAL A:159 , HOH A:211 , HOH A:275
BINDING SITE FOR RESIDUE EDO A 179
05
AC5
SOFTWARE
TYR A:101 , ALA A:106 , LYS A:119 , HOH A:250 , HOH A:282 , HOH A:370
BINDING SITE FOR RESIDUE EDO A 180
06
AC6
SOFTWARE
ASN A:30 , GLN A:109 , THR A:110 , HOH A:241
BINDING SITE FOR RESIDUE EDO A 181
07
AC7
SOFTWARE
VAL A:51 , THR A:52 , SER A:53 , GLY A:55 , LYS A:117 , HOH A:224 , HOH A:330 , HOH A:353 , HOH A:364
BINDING SITE FOR RESIDUE EDO A 182
08
AC8
SOFTWARE
SER A:5 , THR A:32 , ARG A:77 , VAL A:79 , GLY A:156 , HOH A:240 , HOH A:384
BINDING SITE FOR RESIDUE EDO A 183
09
AC9
SOFTWARE
ASN A:71 , ASP A:73 , LYS A:122 , HOH A:279
BINDING SITE FOR RESIDUE EDO A 184
10
BC1
SOFTWARE
THR A:4 , PHE A:146 , GLY A:150 , HOH A:286 , HOH A:428
BINDING SITE FOR RESIDUE EDO A 185
11
BC2
SOFTWARE
LYS A:13 , THR A:14 , VAL A:164 , HOH A:263
BINDING SITE FOR RESIDUE NH4 A 186
12
BC3
SOFTWARE
THR A:68 , LEU A:121 , NH4 A:188 , HOH A:246
BINDING SITE FOR RESIDUE NH4 A 187
13
BC4
SOFTWARE
LEU A:70 , ASN A:71 , SER A:72 , TYR A:95 , GLU A:108 , NH4 A:187
BINDING SITE FOR RESIDUE NH4 A 188
14
BC5
SOFTWARE
ASP A:73 , ASN A:75 , NH4 A:190 , HOH A:415
BINDING SITE FOR RESIDUE NH4 A 189
15
BC6
SOFTWARE
ASN A:75 , SER A:97 , EDO A:177 , NH4 A:189
BINDING SITE FOR RESIDUE NH4 A 190
16
BC7
SOFTWARE
THR A:52 , TYR A:58 , MET A:63 , HOH A:215 , HOH A:260
BINDING SITE FOR RESIDUE NH4 A 191
17
BC8
SOFTWARE
ASN A:27 , ILE A:28 , NH4 A:193
BINDING SITE FOR RESIDUE NH4 A 192
18
BC9
SOFTWARE
GLY A:111 , NH4 A:192 , HOH A:253
BINDING SITE FOR RESIDUE NH4 A 193
19
CC1
SOFTWARE
SER A:53 , ALA A:66 , HOH A:215 , HOH A:362
BINDING SITE FOR RESIDUE EDO A 194
20
CC2
SOFTWARE
THR A:59 , LYS A:60 , SER A:61
BINDING SITE FOR RESIDUE NO3 A 195
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3f2la_ (A:)
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Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Common fold of diphtheria toxin/transcription factors/cytochrome f
(364)
Superfamily
:
Carbohydrate-binding domain
(66)
Family
:
Cellulose-binding domain family III
(37)
Protein domain
:
automated matches
(6)
Acetivibrio cellulolyticus [TaxId: 35830]
(1)
1a
d3f2la_
A:
[
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_3f2lA00 (A:2-172)
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)
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)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
[code=2.60.40.680, no name defined]
(14)
Acetivibrio cellulolyticus. Organism_taxid: 35830.
(1)
1a
3f2lA00
A:2-172
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]
Pfam Domains
(0, 0)
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all PFAM domains
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Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
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select chains 'A' and 'C'
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (72 KB)
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Header - Biol.Unit 1
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