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Asym. Unit
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Asym.Unit (30 KB)
Biol.Unit 1 (25 KB)
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(1)
Title
:
STRUCTURE OF HOP TPR2A DOMAIN IN COMPLEX WITH THE NON-COGNATE HSC70 PEPTIDE LIGAND
Authors
:
T. Kajander, L. Regan
Date
:
06 Oct 08 (Deposition) - 07 Jul 09 (Release) - 02 Apr 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.05
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Tpr2A, Hsp90, Hsc70, Tetratricopeptide Repeat, Nucleus, Tpr Repeat, Chaperone, Stress Response
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Kajander, J. N. Sachs, A. Goldman, L. Regan
Electrostatic Interactions Of Hsp-Organizing Protein Tetratricopeptide Domains With Hsp70 And Hsp90: Computational Analysis And Protein Engineering.
J. Biol. Chem. V. 284 25364 2009
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: NICKEL (II) ION (NIa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
NI
1
Ligand/Ion
NICKEL (II) ION
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:26 , HOH A:88 , HOH A:136 , HIS A:247 , HIS A:321 , LYS A:325
BINDING SITE FOR RESIDUE NI A 1
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: TPR (-|-|-|A:225-258|A:259-292|A:300-33...)
2: TPR_REGION (-|A:225-349)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TPR
PS50005
TPR repeat profile.
STIP1_HUMAN
4-37
38-71
72-105
225-258
259-292
300-333
360-393
394-427
428-461
3
-
-
-
A:225-258
A:259-292
A:300-333
-
-
-
2
TPR_REGION
PS50293
TPR repeat region circular profile.
STIP1_HUMAN
4-105
225-461
1
-
A:225-349
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Exons
(5, 5)
Info
All Exons
Exon 1.6 (A:222-224)
Exon 1.7 (A:225-267)
Exon 1.8 (A:267-301)
Exon 1.9 (A:301-341)
Exon 1.10 (A:342-349)
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All Exon Boundaries
1: Boundary 1.5/1.6
2: Boundary 1.6/1.7
3: Boundary 1.7/1.8
4: Boundary 1.8/1.9
5: Boundary 1.9/1.10
6: Boundary 1.10/1.11
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2
ENST00000305218
2
ENSE00001303761
chr11:
63953587-63953742
156
STIP1_HUMAN
1-3
3
0
-
-
1.3
ENST00000305218
3
ENSE00001292614
chr11:
63960550-63960759
210
STIP1_HUMAN
4-73
70
0
-
-
1.4
ENST00000305218
4
ENSE00001196235
chr11:
63961661-63961802
142
STIP1_HUMAN
74-121
48
0
-
-
1.5
ENST00000305218
5
ENSE00001196229
chr11:
63961951-63962092
142
STIP1_HUMAN
121-168
48
0
-
-
1.6
ENST00000305218
6
ENSE00001196227
chr11:
63963117-63963285
169
STIP1_HUMAN
168-224
57
1
A:222-224
3
1.7
ENST00000305218
7
ENSE00001139237
chr11:
63964743-63964869
127
STIP1_HUMAN
225-267
43
1
A:225-267
43
1.8
ENST00000305218
8
ENSE00001139229
chr11:
63964965-63965067
103
STIP1_HUMAN
267-301
35
1
A:267-301
35
1.9
ENST00000305218
9
ENSE00001139278
chr11:
63965326-63965446
121
STIP1_HUMAN
301-341
41
1
A:301-341
41
1.10
ENST00000305218
10
ENSE00001310490
chr11:
63967412-63967508
97
STIP1_HUMAN
342-374
33
1
A:342-349
8
1.11
ENST00000305218
11
ENSE00001317889
chr11:
63967641-63967765
125
STIP1_HUMAN
374-415
42
0
-
-
1.12
ENST00000305218
12
ENSE00001169747
chr11:
63970348-63970384
37
STIP1_HUMAN
416-428
13
0
-
-
1.13
ENST00000305218
13
ENSE00001169731
chr11:
63970597-63970700
104
STIP1_HUMAN
428-462
35
0
-
-
1.14
ENST00000305218
14
ENSE00001169722
chr11:
63970922-63971094
173
STIP1_HUMAN
463-520
58
0
-
-
1.15b
ENST00000305218
15b
ENSE00001518832
chr11:
63971526-63972020
495
STIP1_HUMAN
520-543
24
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3eska_ (A:)
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
alpha-alpha superhelix
(690)
Superfamily
:
TPR-like
(83)
Family
:
Tetratricopeptide repeat (TPR)
(47)
Protein domain
:
Hop
(3)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d3eska_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_3eskA00 (A:222-349)
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)
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)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Alpha Horseshoe
(399)
Topology
:
Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
(320)
Homologous Superfamily
:
[code=1.25.40.10, no name defined]
(42)
Human (Homo sapiens)
(17)
1a
3eskA00
A:222-349
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Asymmetric Unit 1
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