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3EQN
Biol. Unit 2
Info
Asym.Unit (268 KB)
Biol.Unit 1 (134 KB)
Biol.Unit 2 (134 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF BETA-1,3-GLUCANASE FROM PHANEROCHAETE CHRYSOSPORIUM (LAM55A)
Authors
:
T. Ishida, S. Fushinobu, R. Kawai, M. Kitaoka, K. Igarashi, M. Samejima
Date
:
01 Oct 08 (Deposition) - 03 Feb 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Tandem Beta-Helix Domains, Glycosidase, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Ishida, S. Fushinobu, R. Kawai, M. Kitaoka, K. Igarashi, M. Samejim
Crystal Structure Of Glycoside Hydrolase Family 55 Beta -1, 3-Glucanase From The Basidiomycete Phanerochaete Chrysosporium
J. Biol. Chem. V. 284 10100 2009
(for further references see the
PDB file header
)
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Hetero Components
(4, 9)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
2a: BETA-D-MANNOSE (BMAa)
2b: BETA-D-MANNOSE (BMAb)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
3d: GLYCEROL (GOLd)
3e: GLYCEROL (GOLe)
3f: GLYCEROL (GOLf)
3g: GLYCEROL (GOLg)
3h: GLYCEROL (GOLh)
3i: GLYCEROL (GOLi)
3j: GLYCEROL (GOLj)
3k: GLYCEROL (GOLk)
5a: N-ACETYL-D-GLUCOSAMINE (NAGa)
5b: N-ACETYL-D-GLUCOSAMINE (NAGb)
5c: N-ACETYL-D-GLUCOSAMINE (NAGc)
5d: N-ACETYL-D-GLUCOSAMINE (NAGd)
4a: SODIUM ION (NAa)
4b: SODIUM ION (NAb)
4c: SODIUM ION (NAc)
4d: SODIUM ION (NAd)
6a: ZINC ION (ZNa)
6b: ZINC ION (ZNb)
6c: ZINC ION (ZNc)
6d: ZINC ION (ZNd)
6e: ZINC ION (ZNe)
6f: ZINC ION (ZNf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
BMA
1
Ligand/Ion
BETA-D-MANNOSE
3
GOL
4
Ligand/Ion
GLYCEROL
4
NA
-1
Ligand/Ion
SODIUM ION
5
NAG
2
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
6
ZN
-1
Ligand/Ion
ZINC ION
[
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Sites
(17, 17)
Info
All Sites
01: AC9 (SOFTWARE)
02: BC1 (SOFTWARE)
03: BC2 (SOFTWARE)
04: BC8 (SOFTWARE)
05: BC9 (SOFTWARE)
06: CC1 (SOFTWARE)
07: CC2 (SOFTWARE)
08: CC3 (SOFTWARE)
09: CC4 (SOFTWARE)
10: CC5 (SOFTWARE)
11: CC6 (SOFTWARE)
12: CC7 (SOFTWARE)
13: CC8 (SOFTWARE)
14: CC9 (SOFTWARE)
15: DC1 (SOFTWARE)
16: DC2 (SOFTWARE)
17: DC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC9
SOFTWARE
ASN A:68 , GLY A:71 , ARG A:72 , HOH A:927 , HOH B:1378 , HOH B:1400
BINDING SITE FOR RESIDUE GOL A 761
02
BC1
SOFTWARE
PRO A:355 , THR A:356 , PHE A:357 , HOH A:1024 , HOH A:1026 , GLY B:369 , VAL B:370
BINDING SITE FOR RESIDUE GOL A 762
03
BC2
SOFTWARE
LEU A:316 , THR A:317 , THR A:337 , THR A:338 , HOH A:1174 , HOH A:1360 , SER B:302 , GLN B:359
BINDING SITE FOR RESIDUE GOL A 763
04
BC8
SOFTWARE
ASN B:182 , ASP B:210 , ASN B:231 , ARG B:253 , SER B:380 , NAG B:754 , HOH B:970 , HOH B:1032 , HOH B:1076 , HOH B:1092 , HOH B:1279
BINDING SITE FOR RESIDUE NAG B 753
05
BC9
SOFTWARE
NAG B:753 , BMA B:755 , HOH B:1279 , HOH B:1286
BINDING SITE FOR RESIDUE NAG B 754
06
CC1
SOFTWARE
NAG B:754 , HOH B:1139 , HOH B:1252
BINDING SITE FOR RESIDUE BMA B 755
07
CC2
SOFTWARE
HIS B:383 , ASP B:488 , ACT B:765 , HOH B:1326 , HOH B:1334
BINDING SITE FOR RESIDUE ZN B 756
08
CC3
SOFTWARE
HIS B:508 , GLY B:600 , PRO B:601 , HOH B:1336 , HOH B:1463
BINDING SITE FOR RESIDUE ZN B 757
09
CC4
SOFTWARE
ASP B:575 , HIS B:576 , HOH B:1446 , HOH B:1447 , HOH B:1448 , HOH B:1449
BINDING SITE FOR RESIDUE ZN B 758
10
CC5
SOFTWARE
HIS B:557 , GLU B:597 , HOH B:1494 , HOH B:1556
BINDING SITE FOR RESIDUE NA B 759
11
CC6
SOFTWARE
ASP B:78 , HOH B:1356 , HOH B:1462 , HOH B:1470
BINDING SITE FOR RESIDUE NA B 760
12
CC7
SOFTWARE
ASN B:68 , GLY B:71 , ARG B:72 , HOH B:1077 , HOH B:1393 , HOH B:1394 , HOH B:1469
BINDING SITE FOR RESIDUE GOL B 761
13
CC8
SOFTWARE
GLN B:146 , ASN B:147 , PHE B:149 , GLN B:176 , SER B:204 , TRP B:572 , ASP B:575 , GLU B:610 , HIS B:611 , GLU B:633 , TYR B:636 , HOH B:932 , HOH B:1362 , HOH B:1449
BINDING SITE FOR RESIDUE GOL B 762
14
CC9
SOFTWARE
VAL B:144 , GLN B:146 , ASN B:147 , GOL B:764 , HOH B:828 , HOH B:862 , HOH B:1361 , HOH B:1362 , HOH B:1363 , HOH B:1448
BINDING SITE FOR RESIDUE GOL B 763
15
DC1
SOFTWARE
GLU B:633 , TYR B:636 , PHE B:684 , PHE B:685 , GOL B:763 , ACT B:766 , HOH B:862 , HOH B:1008 , HOH B:1362 , HOH B:1446
BINDING SITE FOR RESIDUE GOL B 764
16
DC2
SOFTWARE
PHE B:20 , ARG B:154 , HIS B:383 , GLN B:385 , ZN B:756 , HOH B:1326
BINDING SITE FOR RESIDUE ACT B 765
17
DC3
SOFTWARE
GLN B:146 , GOL B:764 , HOH B:787 , HOH B:1361
BINDING SITE FOR RESIDUE ACT B 766
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain B
Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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Show PDB file:
Asym.Unit (268 KB)
Header - Asym.Unit
Biol.Unit 1 (134 KB)
Header - Biol.Unit 1
Biol.Unit 2 (134 KB)
Header - Biol.Unit 2
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