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Getting 'Exon' information from database.
3ELJ
Asym. Unit
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Asym.Unit (72 KB)
Biol.Unit 1 (67 KB)
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(1)
Title
:
JNK1 COMPLEXED WITH A BIS-ANILINO-PYRROLOPYRIMIDINE INHIBITOR.
Authors
:
S. Chamberlain, C. Atkins, F. Deanda, M. Dumble, R. Gerding, A. Groy, S. Korenchuk, R. Kumar, H. Lei, R. Mook, G. Moorthy, A. Redman, J. Rowla L. Shewchuk, G. Vicentini, J. Mosley
Date
:
22 Sep 08 (Deposition) - 30 Dec 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
C-Jun N-Terminal Kinase, Mitogen-Activated Protein Kinase, Atp- Binding, Kinase, Nucleotide-Binding, Phosphoprotein, Serine/Threonine-Protein Kinase, Transferase, Jnk1
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. D. Chamberlain, A. M. Redman, J. W. Wilson, F. Deanda, J. B. Shotwell R. Gerding, H. Lei, B. Yang, K. L. Stevens, A. M. Hassell, L. M. Shewchuk M. A. Leesnitzer, J. L. Smith, P. Sabbatini, C. Atkins, A. Groy, J. L. Rowand, R. Kumar, R. A. Mook, G. Moorthy, S. Patnaik
Optimization Of 4, 6-Bis-Anilino-1H-Pyrrolo[2, 3-D]Pyrimidine Igf-1R Tyrosine Kinase Inhibitors Towards Jnk Selectivity.
Bioorg. Med. Chem. Lett. V. 19 360 2009
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: 2-FLUORO-6-{[2-({2-METHOXY-4-[(MET... (GS7a)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GS7
1
Ligand/Ion
2-FLUORO-6-{[2-({2-METHOXY-4-[(METHYLSULFONYL)METHYL]PHENYL}AMINO)-7H-PYRROLO[2,3-D]PYRIMIDIN-4-YL]AMINO}BENZAMIDE
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ILE A:32 , GLY A:33 , SER A:34 , GLY A:35 , VAL A:40 , ALA A:53 , GLU A:109 , MET A:111 , ASP A:112 , ALA A:113 , ASN A:114 , GLN A:117 , SER A:155 , ASN A:156 , LEU A:168 , HOH A:507 , HOH A:518 , HOH A:605
BINDING SITE FOR RESIDUE GS7 A 365
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_042258 (G171S, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_042258
G
171
S
MK08_HUMAN
Unclassified
---
A
G
171
S
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: MAPK (A:61-163)
2: PROTEIN_KINASE_ST (A:147-159)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
MAPK
PS01351
MAP kinase signature.
MK08_HUMAN
61-163
1
A:61-163
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
MK08_HUMAN
147-159
1
A:147-159
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Exons
(10, 10)
Info
All Exons
Exon 1.5b (A:7-41)
Exon 1.6 (A:41-84)
Exon 1.7 (A:85-104)
Exon 1.8c (A:104-150)
Exon 1.9b (A:151-206 (gaps))
Exon 1.10 (A:206-230)
Exon 1.12e (A:230-291)
Exon 1.12g (A:291-332)
Exon 1.12j (A:333-354 (gaps))
Exon 1.13b (A:354-364)
View:
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All Exon Boundaries
01: Boundary 1.1c/1.5b
02: Boundary 1.5b/1.6
03: Boundary 1.6/1.7
04: Boundary 1.7/1.8c
05: Boundary 1.8c/1.9b
06: Boundary 1.9b/1.10
07: Boundary 1.10/1.12e
08: Boundary 1.12e/1.12g
09: Boundary 1.12g/1.12j
10: Boundary 1.12j/1.13b
11: Boundary 1.13b/1.14g
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1c
ENST00000374189
1c
ENSE00001462753
chr10:
49514733-49514864
132
MK08_HUMAN
-
0
0
-
-
1.5b
ENST00000374189
5b
ENSE00002166090
chr10:
49609655-49609825
171
MK08_HUMAN
1-41
41
1
A:7-41
35
1.6
ENST00000374189
6
ENSE00000883668
chr10:
49612895-49613024
130
MK08_HUMAN
41-84
44
1
A:41-84
44
1.7
ENST00000374189
7
ENSE00001772891
chr10:
49617922-49617980
59
MK08_HUMAN
85-104
20
1
A:85-104
20
1.8c
ENST00000374189
8c
ENSE00001723558
chr10:
49618073-49618211
139
MK08_HUMAN
104-150
47
1
A:104-150
47
1.9b
ENST00000374189
9b
ENSE00001657864
chr10:
49628198-49628363
166
MK08_HUMAN
151-206
56
1
A:151-206 (gaps)
56
1.10
ENST00000374189
10
ENSE00001705464
chr10:
49632131-49632202
72
MK08_HUMAN
206-230
25
1
A:206-230
25
1.12e
ENST00000374189
12e
ENSE00000702776
chr10:
49633931-49634113
183
MK08_HUMAN
230-291
62
1
A:230-291
62
1.12g
ENST00000374189
12g
ENSE00001263989
chr10:
49634423-49634547
125
MK08_HUMAN
291-332
42
1
A:291-332
42
1.12j
ENST00000374189
12j
ENSE00000883675
chr10:
49635123-49635186
64
MK08_HUMAN
333-354
22
1
A:333-354 (gaps)
22
1.13b
ENST00000374189
13b
ENSE00000702787
chr10:
49639236-49639313
78
MK08_HUMAN
354-380
27
1
A:354-364
11
1.14g
ENST00000374189
14g
ENSE00001462730
chr10:
49642927-49647403
4477
MK08_HUMAN
380-427
48
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3elja_ (A:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
automated matches
(542)
Human (Homo sapiens) [TaxId: 9606]
(452)
1a
d3elja_
A:
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_3eljA01 (A:7-112)
2a: CATH_3eljA02 (A:113-332)
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
3eljA01
A:7-112
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
2a
3eljA02
A:113-332
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Chain A
Asymmetric Unit 1
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