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3EDU
Asym. Unit
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Asym.Unit (40 KB)
Biol.Unit 1 (36 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE ANKYRIN-BINDING DOMAIN OF HUMAN ERYTHROID SPECTRIN
Authors
:
M. Simonovic, P. Stabach, I. Simonovic, T. A. Steitz, J. S. Morrow
Date
:
03 Sep 08 (Deposition) - 10 Feb 09 (Release) - 20 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Spectrin, Ankyrin, Ankyrin-Binding Domain, Actin Capping, Actin- Binding, Cytoskeleton, Disease Mutation, Elliptocytosis, Hereditary Hemolytic Anemia, Phosphoprotein, Structural Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. R. Stabach, I. Simonovic, M. A. Ranieri, M. S. Aboodi, T. A. Steitz, M. Simonovic, J. S. Morrow
The Structure Of The Ankyrin-Binding Site Of {Beta}-Spectri Reveals How Tandem Spectrin-Repeats Generate Unique Ligand-Binding Properties
Blood V. 113 5377 2009
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
(3, 3)
Info
All Exons
Exon 1.24 (A:1691-1726)
Exon 1.25 (A:1727-1851 (gaps))
Exon 1.26 (A:1852-1893)
View:
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All Exon Boundaries
1: Boundary 1.23/1.24
2: Boundary 1.24/1.25
3: Boundary 1.25/1.26
4: Boundary 1.26/1.27
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000389721
1
ENSE00002200989
chr14:
65289866-65289665
202
SPTB1_HUMAN
1-50
50
0
-
-
1.2
ENST00000389721
2
ENSE00001692272
chr14:
65271808-65271657
152
SPTB1_HUMAN
50-100
51
0
-
-
1.3
ENST00000389721
3
ENSE00001642694
chr14:
65270498-65270325
174
SPTB1_HUMAN
101-158
58
0
-
-
1.4
ENST00000389721
4
ENSE00001647147
chr14:
65269035-65268944
92
SPTB1_HUMAN
159-189
31
0
-
-
1.5
ENST00000389721
5
ENSE00001592915
chr14:
65268552-65268472
81
SPTB1_HUMAN
189-216
28
0
-
-
1.6
ENST00000389721
6
ENSE00001601006
chr14:
65268118-65268003
116
SPTB1_HUMAN
216-255
40
0
-
-
1.7
ENST00000389721
7
ENSE00001788289
chr14:
65267586-65267474
113
SPTB1_HUMAN
255-292
38
0
-
-
1.8
ENST00000389721
8
ENSE00001643410
chr14:
65266652-65266465
188
SPTB1_HUMAN
293-355
63
0
-
-
1.9
ENST00000389721
9
ENSE00001793364
chr14:
65264564-65264447
118
SPTB1_HUMAN
355-394
40
0
-
-
1.10
ENST00000389721
10
ENSE00001786358
chr14:
65263433-65263275
159
SPTB1_HUMAN
395-447
53
0
-
-
1.11
ENST00000389721
11
ENSE00001689221
chr14:
65262357-65262055
303
SPTB1_HUMAN
448-548
101
0
-
-
1.12
ENST00000389721
12
ENSE00001643743
chr14:
65261335-65261185
151
SPTB1_HUMAN
549-599
51
0
-
-
1.13
ENST00000389721
13
ENSE00001699666
chr14:
65260585-65259715
871
SPTB1_HUMAN
599-889
291
0
-
-
1.14
ENST00000389721
14
ENSE00001604309
chr14:
65258574-65258437
138
SPTB1_HUMAN
889-935
47
0
-
-
1.15
ENST00000389721
15
ENSE00001594267
chr14:
65253878-65253122
757
SPTB1_HUMAN
935-1187
253
0
-
-
1.16
ENST00000389721
16
ENSE00001597703
chr14:
65252669-65252467
203
SPTB1_HUMAN
1188-1255
68
0
-
-
1.17
ENST00000389721
17
ENSE00000392073
chr14:
65252345-65252255
91
SPTB1_HUMAN
1255-1285
31
0
-
-
1.18
ENST00000389721
18
ENSE00000867578
chr14:
65251111-65250965
147
SPTB1_HUMAN
1286-1334
49
0
-
-
1.19
ENST00000389721
19
ENSE00001506737
chr14:
65249271-65249008
264
SPTB1_HUMAN
1335-1422
88
0
-
-
1.20
ENST00000389721
20
ENSE00001506736
chr14:
65246649-65246443
207
SPTB1_HUMAN
1423-1491
69
0
-
-
1.21
ENST00000389721
21
ENSE00000902497
chr14:
65245964-65245875
90
SPTB1_HUMAN
1492-1521
30
0
-
-
1.22
ENST00000389721
22
ENSE00000658448
chr14:
65242121-65241843
279
SPTB1_HUMAN
1522-1614
93
0
-
-
1.23
ENST00000389721
23
ENSE00000392079
chr14:
65241245-65241115
131
SPTB1_HUMAN
1615-1658
44
0
-
-
1.24
ENST00000389721
24
ENSE00000867584
chr14:
65240142-65239938
205
SPTB1_HUMAN
1658-1726
69
1
A:1691-1726
36
1.25
ENST00000389721
25
ENSE00000867585
chr14:
65239672-65239298
375
SPTB1_HUMAN
1727-1851
125
1
A:1727-1851 (gaps)
125
1.26
ENST00000389721
26
ENSE00000902494
chr14:
65237847-65237603
245
SPTB1_HUMAN
1852-1933
82
1
A:1852-1893
42
1.27
ENST00000389721
27
ENSE00000902493
chr14:
65236446-65236308
139
SPTB1_HUMAN
1933-1979
47
0
-
-
1.28
ENST00000389721
28
ENSE00000392084
chr14:
65235836-65235752
85
SPTB1_HUMAN
1980-2008
29
0
-
-
1.29
ENST00000389721
29
ENSE00000867589
chr14:
65234577-65234381
197
SPTB1_HUMAN
2008-2073
66
0
-
-
1.30
ENST00000389721
30
ENSE00000658438
chr14:
65234070-65234021
50
SPTB1_HUMAN
2074-2090
17
0
-
-
1.31c
ENST00000389721
31c
ENSE00001506734
chr14:
65233519-65233148
372
SPTB1_HUMAN
2090-2137
48
0
-
-
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