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3EBG
Asym. Unit
Info
Asym.Unit (311 KB)
Biol.Unit 1 (305 KB)
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(1)
Title
:
STRUCTURE OF THE M1 ALANYLAMINOPEPTIDASE FROM MALARIA
Authors
:
S. Mcgowan, C. J. Porter, A. M. Buckle, J. C. Whisstock
Date
:
27 Aug 08 (Deposition) - 27 Jan 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Hydrolase, Aminopeptidase, Metal-Binding, Metalloprotease, Protease
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Mcgowan, C. J. Porter, J. Lowther, C. M. Stack, S. J. Golding, T. S. Skinner-Adams, K. R. Trenholme, F. Teuscher, S. M. Donnelly, J. Grembecka, A. Mucha, P. Kafarski, R. Degori, A. M. Buckle, D. L. Gardiner, J. C. Whisstock, J. P. Dalton
Structural Basis For The Inhibition Of The Essential Plasmodium Falciparum M1 Neutral Aminopeptidase
Proc. Natl. Acad. Sci. Usa V. 106 2537 2009
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Hetero Components
(3, 8)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
3a: ZINC ION (ZNa)
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Label:
No.
Name
Count
Type
Full Name
1
GOL
5
Ligand/Ion
GLYCEROL
2
MG
2
Ligand/Ion
MAGNESIUM ION
3
ZN
1
Ligand/Ion
ZINC ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:86 , HIS A:496 , HIS A:500 , GLU A:519 , MG A:1085 , HOH A:1655
BINDING SITE FOR RESIDUE ZN A 1
2
AC2
SOFTWARE
ZN A:1 , HOH A:86 , TYR A:580 , HOH A:1149 , HOH A:1222 , HOH A:1456 , HOH A:1519 , HOH A:1655
BINDING SITE FOR RESIDUE MG A1085
3
AC3
SOFTWARE
HOH A:83 , HOH A:186 , GLY A:250 , HOH A:1385 , HOH A:1445 , HOH A:1520
BINDING SITE FOR RESIDUE MG A 2
4
AC4
SOFTWARE
HOH A:82 , HOH A:119 , LYS A:479 , TYR A:880 , PHE A:881 , VAL A:887 , ASP A:888 , GLN A:891 , ARG A:895 , TYR A:925
BINDING SITE FOR RESIDUE GOL A 3
5
AC5
SOFTWARE
HOH A:46 , VAL A:459 , GLY A:460 , ASN A:471 , ASN A:473 , SER A:474 , ARG A:489 , ARG A:997 , HOH A:1628
BINDING SITE FOR RESIDUE GOL A 4
6
AC6
SOFTWARE
HOH A:144 , HIS A:653 , LYS A:676 , TYR A:741 , ASN A:835 , HOH A:1603 , HOH A:1621
BINDING SITE FOR RESIDUE GOL A 5
7
AC7
SOFTWARE
THR A:577 , TYR A:580 , ASP A:581
BINDING SITE FOR RESIDUE GOL A 6
8
AC8
SOFTWARE
GLU A:957 , ASN A:992 , ASP A:995 , HOH A:1278 , HOH A:1370 , HOH A:1411
BINDING SITE FOR RESIDUE GOL A 7
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: ZINC_PROTEASE (A:493-502)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZINC_PROTEASE
PS00142
Neutral zinc metallopeptidases, zinc-binding region signature.
AMP1_PLAFQ
493-502
1
A:493-502
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (311 KB)
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