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3EB4
Asym. Unit
Info
Asym.Unit (63 KB)
Biol.Unit 1 (225 KB)
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(1)
Title
:
VOLTAGE-DEPENDENT K+ CHANNEL BETA SUBUNIT (I211R) IN COMPLEX WITH CORTISONE
Authors
:
Y. Pan, J. Weng, V. Kabaleeswaran, H. Li, Y. Cao, R. C. Bhosle, M. Zhou
Date
:
26 Aug 08 (Deposition) - 23 Sep 08 (Release) - 11 Aug 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A
Biol. Unit 1: A (4x)
Keywords
:
Kvbeta, Cortisone, Interface, Cytoplasm, Ion Transport, Ionic Channel, Nadp, Phosphoprotein, Potassium, Potassium Transport, Transport, Voltage-Gated Channel, Transport Protein, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Pan, J. Weng, V. Kabaleeswaran, H. Li, Y. Cao, R. C. Bhosle, M. Zhou
Cortisone Dissociates The Shaker Family K+ Channels From Their Beta Subunits.
Nat. Chem. Biol. V. 4 708 2008
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPa)
2a: 17,21-DIHYDROXYPREGNA-1,4-DIENE-3,... (PDNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
NDP
1
Ligand/Ion
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
2
PDN
1
Ligand/Ion
17,21-DIHYDROXYPREGNA-1,4-DIENE-3,11,20-TRIONE
[
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:55 , THR A:56 , TRP A:57 , GLN A:63 , ASP A:85 , TYR A:90 , LYS A:118 , SER A:188 , ARG A:189 , GLN A:214 , TRP A:243 , SER A:244 , PRO A:245 , LEU A:246 , ALA A:247 , CYS A:248 , GLY A:249 , SER A:252 , LYS A:254 , ARG A:264 , LEU A:321 , LEU A:322 , GLY A:323 , SER A:325 , GLN A:329 , GLU A:332 , ASN A:333 , PDN A:501 , HOH A:1021 , HOH A:1026 , HOH A:1028 , HOH A:1035 , HOH A:1133
BINDING SITE FOR RESIDUE NDP A1001
2
AC2
SOFTWARE
TRP A:57 , VAL A:89 , TYR A:90 , LYS A:118 , TRP A:121 , ASN A:158 , ARG A:189 , NDP A:1001 , HOH A:1066
BINDING SITE FOR RESIDUE PDN A 501
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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End label:
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Exons
(14, 14)
Info
All Exons
Exon 1.3 (A:35-40)
Exon 1.4 (A:40-55)
Exon 1.5 (A:55-67)
Exon 1.6 (A:68-94)
Exon 1.7 (A:94-109)
Exon 1.8 (A:109-124)
Exon 1.9 (A:124-139)
Exon 1.10 (A:139-168)
Exon 1.11 (A:168-196)
Exon 1.12 (A:197-237)
Exon 1.13 (A:237-268)
Exon 1.14 (A:269-309)
Exon 1.15 (A:309-338)
Exon 1.16 (A:339-361)
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All Exon Boundaries
01: Boundary 1.2/1.3
02: Boundary 1.3/1.4
03: Boundary 1.4/1.5
04: Boundary 1.5/1.6
05: Boundary 1.6/1.7
06: Boundary 1.7/1.8
07: Boundary 1.8/1.9
08: Boundary 1.9/1.10
09: Boundary 1.10/1.11
10: Boundary 1.11/1.12
11: Boundary 1.12/1.13
12: Boundary 1.13/1.14
13: Boundary 1.14/1.15
14: Boundary 1.15/1.16
15: Boundary 1.16/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSRNOT00000015840
1
ENSRNOE00000308500
chr5:
169710725-169710296
430
KCAB2_RAT
-
0
0
-
-
1.2
ENSRNOT00000015840
2
ENSRNOE00000112803
chr5:
169670219-169670091
129
KCAB2_RAT
1-26
26
0
-
-
1.3
ENSRNOT00000015840
3
ENSRNOE00000109396
chr5:
169668964-169668923
42
KCAB2_RAT
26-40
15
1
A:35-40
6
1.4
ENSRNOT00000015840
4
ENSRNOE00000109593
chr5:
169644460-169644417
44
KCAB2_RAT
40-55
16
1
A:40-55
16
1.5
ENSRNOT00000015840
5
ENSRNOE00000112181
chr5:
169643660-169643623
38
KCAB2_RAT
55-67
13
1
A:55-67
13
1.6
ENSRNOT00000015840
6
ENSRNOE00000112310
chr5:
169638175-169638096
80
KCAB2_RAT
68-94
27
1
A:68-94
27
1.7
ENSRNOT00000015840
7
ENSRNOE00000109963
chr5:
169635470-169635426
45
KCAB2_RAT
94-109
16
1
A:94-109
16
1.8
ENSRNOT00000015840
8
ENSRNOE00000110175
chr5:
169633990-169633946
45
KCAB2_RAT
109-124
16
1
A:109-124
16
1.9
ENSRNOT00000015840
9
ENSRNOE00000112448
chr5:
169632945-169632902
44
KCAB2_RAT
124-139
16
1
A:124-139
16
1.10
ENSRNOT00000015840
10
ENSRNOE00000112513
chr5:
169632029-169631943
87
KCAB2_RAT
139-168
30
1
A:139-168
30
1.11
ENSRNOT00000015840
11
ENSRNOE00000110546
chr5:
169628084-169627999
86
KCAB2_RAT
168-196
29
1
A:168-196
29
1.12
ENSRNOT00000015840
12
ENSRNOE00000110711
chr5:
169626318-169626198
121
KCAB2_RAT
197-237
41
1
A:197-237
41
1.13
ENSRNOT00000015840
13
ENSRNOE00000110885
chr5:
169626108-169626014
95
KCAB2_RAT
237-268
32
1
A:237-268
32
1.14
ENSRNOT00000015840
14
ENSRNOE00000111076
chr5:
169625453-169625333
121
KCAB2_RAT
269-309
41
1
A:269-309
41
1.15
ENSRNOT00000015840
15
ENSRNOE00000111256
chr5:
169624855-169624767
89
KCAB2_RAT
309-338
30
1
A:309-338
30
1.16
ENSRNOT00000015840
16
ENSRNOE00000111460
chr5:
169624192-169624099
94
KCAB2_RAT
339-367
29
1
A:339-361
23
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3eb4a_ (A:)
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Protein Domains
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(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
NAD(P)-linked oxidoreductase
(286)
Family
:
Aldo-keto reductases (NADP)
(251)
Protein domain
:
Voltage-dependent K+ channel beta subunit
(11)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(11)
1a
d3eb4a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_3eb4A00 (A:35-361)
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Organisms
(
)
(
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Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
NADP-dependent oxidoreductase
(181)
Brown rat,rat,rats (Rattus norvegicus)
(3)
1a
3eb4A00
A:35-361
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Pfam Domains
(0, 0)
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Protein & NOT Site
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Chain A
Asymmetric Unit 1
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Asym.Unit (63 KB)
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