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3E33
Biol. Unit 3
Info
Asym.Unit (131 KB)
Biol.Unit 1 (126 KB)
Biol.Unit 2 (60 KB)
Biol.Unit 3 (70 KB)
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(1)
Title
:
PROTEIN FARNESYLTRANSFERASE COMPLEXED WITH FPP AND ETHYLENEDIAMINE SCAFFOLD INHIBITOR 7
Authors
:
M. A. Hast, L. S. Beese
Date
:
06 Aug 08 (Deposition) - 10 Mar 09 (Release) - 10 Mar 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Biol. Unit 2: A (1x)
Biol. Unit 3: B (1x)
Keywords
:
Ftase, Protein Farnesyltransferase, Farnesyltransferase, Malaria, Plasmodium, Falciparum, Antimalarial, Inhibitor, Ethylenediamine, Prenyltransferase, Transferase, Metal- Binding, Phosphoprotein, Zinc
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. A. Hast, S. Fletcher, C. G. Cummings, E. E. Pusateri, M. A. Blaskovich, K. Rivas, M. H. Gelb, W. C. Van Voorhis, S. M. Sebti, A. D. Hamilton, L. S. Beese
Structural Basis For Binding And Selectivity Of Antimalarial And Anticancer Ethylenediamine Inhibitors To Protein Farnesyltransferase.
Chem. Biol. V. 16 181 2009
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: N-BENZYL-N-(2-{(4-CYANOPHENYL)[(1-... (ED7a)
2a: FARNESYL DIPHOSPHATE (FPPa)
3a: ZINC ION (ZNa)
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No.
Name
Count
Type
Full Name
1
ED7
1
Ligand/Ion
N-BENZYL-N-(2-{(4-CYANOPHENYL)[(1-METHYL-1H-IMIDAZOL-5-YL)METHYL]AMINO}ETHYL)-2-METHYLBENZENESULFONAMIDE
2
FPP
1
Ligand/Ion
FARNESYL DIPHOSPHATE
3
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP B:297 , CYS B:299 , HIS B:362
BINDING SITE FOR RESIDUE ZN B 1001
2
AC2
SOFTWARE
LYS A:164 , TYR A:166 , HIS B:248 , GLY B:250 , CYS B:254 , ARG B:291 , LYS B:294 , TYR B:300 , TRP B:303 , HOH B:2565 , HOH B:2566 , HOH B:2568 , HOH B:2587
BINDING SITE FOR RESIDUE FPP B 1002
3
AC3
SOFTWARE
TYR A:166 , TYR B:93 , LEU B:96 , TRP B:102 , TRP B:106 , ASP B:297 , TYR B:300 , ASP B:359 , PHE B:360 , TYR B:361 , HIS B:362
BINDING SITE FOR RESIDUE ED7 B 1003
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d3e33a_ (A:)
2a: SCOP_d3e33b_ (B:)
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Organisms
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(
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Class
:
All alpha proteins
(14657)
Fold
:
alpha-alpha superhelix
(690)
Superfamily
:
Protein prenylyltransferase
(68)
Family
:
Protein prenylyltransferase
(68)
Protein domain
:
Protein farnesyltransferase alpha-subunit
(64)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(51)
1a
d3e33a_
A:
Fold
:
alpha/alpha toroid
(324)
Superfamily
:
Terpenoid cyclases/Protein prenyltransferases
(151)
Family
:
Protein prenyltransferases
(86)
Protein domain
:
Protein farnesyltransferase, beta-subunit
(63)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(50)
2a
d3e33b_
B:
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_3e33A00 (A:55-377)
2a: CATH_3e33B00 (B:17-423)
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Organisms
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)
(
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Class
:
Mainly Alpha
(13335)
Architecture
:
Alpha Horseshoe
(399)
Topology
:
Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
(320)
Homologous Superfamily
:
[code=1.25.40.120, no name defined]
(62)
Rat (Rattus norvegicus)
(9)
1a
3e33A00
A:55-377
Architecture
:
Alpha/alpha barrel
(251)
Topology
:
Glycosyltransferase
(233)
Homologous Superfamily
:
[code=1.50.10.20, no name defined]
(105)
Rat (Rattus norvegicus)
(21)
2a
3e33B00
B:17-423
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Pfam Domains
(0, 0)
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Chain B
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (131 KB)
Header - Asym.Unit
Biol.Unit 1 (126 KB)
Header - Biol.Unit 1
Biol.Unit 2 (60 KB)
Header - Biol.Unit 2
Biol.Unit 3 (70 KB)
Header - Biol.Unit 3
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