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3DVU
Asym. Unit
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Asym.Unit (58 KB)
Biol.Unit 1 (27 KB)
Biol.Unit 2 (28 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE COMPLEX OF MURINE GAMMA-HERPESVIRUS 68 BCL-2 HOMOLOG M11 AND THE BECLIN 1 BH3 DOMAIN
Authors
:
S. Sinha
Date
:
20 Jul 08 (Deposition) - 07 Oct 08 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
Autophagy, Protein-Protein Complex, Viral Bcl-2, Beclin 1, Apoptosis, M11, Antiviral Defense, Bh3 Domain, Coiled Coil, Cytoplasm, Golgi Apparatus, Membrane, Polymorphism, Viral Protein/Apoptosis Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Sinha, C. L. Colbert, N. Becker, Y. Wei, B. Levine
Molecular Basis Of The Regulation Of Beclin 1-Dependent Autophagy By The Gamma-Herpesvirus 68 Bcl-2 Homolog M11
Autophagy V. 4 989 2008
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
(2, 4)
Info
All Exons
Exon 1.5 (C:106-117 | D:105-117)
Exon 1.6 (C:118-129 | D:118-128)
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All Exon Boundaries
1: Boundary 1.4/1.5
2: Boundary 1.5/1.6
3: Boundary 1.6/1.7
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000361523
1a
ENSE00001742671
chr17:
40976310-40976151
160
BECN1_HUMAN
-
0
0
-
-
1.2
ENST00000361523
2
ENSE00001308672
chr17:
40975897-40975766
132
BECN1_HUMAN
1-44
44
0
-
-
1.3
ENST00000361523
3
ENSE00000899042
chr17:
40972859-40972792
68
BECN1_HUMAN
44-66
23
0
-
-
1.4
ENST00000361523
4
ENSE00000899040
chr17:
40971627-40971566
62
BECN1_HUMAN
67-87
21
0
-
-
1.5
ENST00000361523
5
ENSE00000899038
chr17:
40970895-40970805
91
BECN1_HUMAN
87-117
31
2
C:106-117
D:105-117
12
13
1.6
ENST00000361523
6
ENSE00000899036
chr17:
40970698-40970562
137
BECN1_HUMAN
118-163
46
2
C:118-129
D:118-128
12
11
1.7
ENST00000361523
7
ENSE00000899034
chr17:
40970433-40970239
195
BECN1_HUMAN
163-228
66
0
-
-
1.8
ENST00000361523
8
ENSE00000899033
chr17:
40968072-40967926
147
BECN1_HUMAN
228-277
50
0
-
-
1.9
ENST00000361523
9
ENSE00000899031
chr17:
40966691-40966542
150
BECN1_HUMAN
277-327
51
0
-
-
1.10
ENST00000361523
10
ENSE00001214699
chr17:
40966026-40965966
61
BECN1_HUMAN
327-347
21
0
-
-
1.11
ENST00000361523
11
ENSE00001214694
chr17:
40963815-40963673
143
BECN1_HUMAN
348-395
48
0
-
-
1.12b
ENST00000361523
12b
ENSE00001754747
chr17:
40962946-40962150
797
BECN1_HUMAN
395-450
56
0
-
-
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SCOP Domains
(1, 2)
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All SCOP Domains
1a: SCOP_d3dvua_ (A:)
1b: SCOP_d3dvub_ (B:)
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Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
Toxins' membrane translocation domains
(135)
Superfamily
:
Bcl-2 inhibitors of programmed cell death
(113)
Family
:
Bcl-2 inhibitors of programmed cell death
(102)
Protein domain
:
Bcl-2 homolog V-bcl-2
(3)
Murid herpesvirus 4 [TaxId: 33708]
(3)
1a
d3dvua_
A:
1b
d3dvub_
B:
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CATH Domains
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Asym.Unit (58 KB)
Header - Asym.Unit
Biol.Unit 1 (27 KB)
Header - Biol.Unit 1
Biol.Unit 2 (28 KB)
Header - Biol.Unit 2
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