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3DQS
Asym. Unit
Info
Asym.Unit (151 KB)
Biol.Unit 1 (144 KB)
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(1)
Title
:
STRUCTURE OF ENDOTHELIAL NOS HEME DOMAIN IN COMPLEX WITH A INHIBITOR (+-)-N1-{CIS-4'-[(6"-AMINO-4"-METHYLPYRIDIN-2"-YL)METHYL]PYRROLIDIN-3'-YL}-N2-(4'-CHLOROBENZYL)ETHANE-1,2-DIAMINE
Authors
:
J. Igarashi, H. Li, T. L. Poulos
Date
:
09 Jul 08 (Deposition) - 31 Mar 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.03
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Nitric Oxide Synthase Heme Enzyme Inhibitor, Blood Coagulation, Calmodulin-Binding, Cytoskeleton, Fad, Fmn, Golgi Apparatus, Heme, Iron, Lipoprotein, Membrane, Metal-Binding, Myristate, Nadp, Oxidoreductase, Palmitate, Phosphoprotein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Igarashi, H. Li, J. Jamal, H. Ji, J. Fang, G. R. Lawton, R. B. Silverman, T. L. Poulos
Crystal Structures Of Constitutive Nitric Oxide Synthases I Complex With De Novo Designed Inhibitors.
J. Med. Chem. V. 52 2060 2009
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Hetero Components
(7, 13)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: CACODYLATE ION (CACa)
2b: CACODYLATE ION (CACb)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
4a: 5,6,7,8-TETRAHYDROBIOPTERIN (H4Ba)
4b: 5,6,7,8-TETRAHYDROBIOPTERIN (H4Bb)
5a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
5b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
6a: N-{(3S,4S)-4-[(6-AMINO-4-METHYLPYR... (JI3a)
6b: N-{(3S,4S)-4-[(6-AMINO-4-METHYLPYR... (JI3b)
7a: ZINC ION (ZNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
CAC
2
Ligand/Ion
CACODYLATE ION
3
GOL
2
Ligand/Ion
GLYCEROL
4
H4B
2
Ligand/Ion
5,6,7,8-TETRAHYDROBIOPTERIN
5
HEM
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
6
JI3
2
Ligand/Ion
N-{(3S,4S)-4-[(6-AMINO-4-METHYLPYRIDIN-2-YL)METHYL]PYRROLIDIN-3-YL}-N'-(4-CHLOROBENZYL)ETHANE-1,2-DIAMINE
7
ZN
1
Ligand/Ion
ZINC ION
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TRP A:324 , CYS A:384 , ARG A:440 , GLY A:441
BINDING SITE FOR RESIDUE CAC A 850
02
AC2
SOFTWARE
GLY A:188 , TRP A:358 , VAL A:420 , SER A:428 , HOH A:1040 , HOH A:1049 , HOH A:1123
BINDING SITE FOR RESIDUE ACT A 860
03
AC3
SOFTWARE
CYS A:96 , CYS A:101 , CYS B:96 , CYS B:101
BINDING SITE FOR RESIDUE ZN A 900
04
AC4
SOFTWARE
TYR B:83 , TRP B:324 , CYS B:384
BINDING SITE FOR RESIDUE CAC B 850
05
AC5
SOFTWARE
TRP B:358 , VAL B:420 , SER B:428 , HOH B:1098 , HOH B:1099
BINDING SITE FOR RESIDUE ACT B 860
06
AC6
SOFTWARE
TRP A:180 , ARG A:185 , CYS A:186 , VAL A:187 , SER A:228 , MET A:341 , PHE A:355 , SER A:356 , TRP A:358 , TRP A:449 , TYR A:477 , H4B A:760 , JI3 A:800 , HOH A:919 , HOH A:1007 , HOH A:1057
BINDING SITE FOR RESIDUE HEM A 700
07
AC7
SOFTWARE
SER A:104 , ARG A:367 , ALA A:448 , TRP A:449 , HEM A:700 , GOL A:880 , HOH A:919 , HOH A:941 , HOH A:1054 , TRP B:447 , PHE B:462 , HOH B:890
BINDING SITE FOR RESIDUE H4B A 760
08
AC8
SOFTWARE
LEU A:107 , GLN A:249 , PRO A:336 , VAL A:338 , PHE A:355 , GLY A:357 , TRP A:358 , TYR A:359 , GLU A:363 , TRP A:449 , TYR A:477 , HEM A:700 , GOL A:880 , HOH A:901 , HOH A:1133 , TRP B:76
BINDING SITE FOR RESIDUE JI3 A 800
09
AC9
SOFTWARE
TRP B:180 , ARG B:185 , CYS B:186 , SER B:228 , MET B:341 , PHE B:355 , SER B:356 , TRP B:358 , GLU B:363 , TRP B:449 , TYR B:477 , H4B B:760 , JI3 B:800 , HOH B:941 , HOH B:988 , HOH B:992
BINDING SITE FOR RESIDUE HEM B 700
10
BC1
SOFTWARE
TRP A:447 , PHE A:462 , GLU A:465 , HOH A:967 , SER B:104 , ARG B:367 , ALA B:448 , TRP B:449 , HEM B:700 , GOL B:880 , HOH B:919 , HOH B:988
BINDING SITE FOR RESIDUE H4B B 760
11
BC2
SOFTWARE
TRP A:76 , LEU B:107 , PRO B:336 , PHE B:355 , GLY B:357 , TRP B:358 , TYR B:359 , GLU B:363 , TYR B:477 , HEM B:700 , GOL B:880 , HOH B:881
BINDING SITE FOR RESIDUE JI3 B 800
12
BC3
SOFTWARE
ARG A:367 , HIS A:373 , TRP A:449 , H4B A:760 , JI3 A:800 , HOH B:890
BINDING SITE FOR RESIDUE GOL A 880
13
BC4
SOFTWARE
HOH A:967 , VAL B:106 , ARG B:367 , HIS B:373 , TRP B:449 , H4B B:760 , JI3 B:800
BINDING SITE FOR RESIDUE GOL B 880
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: NOS (A:185-192,B:185-192)
;
View:
Select:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
NOS
PS60001
Nitric oxide synthase (NOS) signature.
NOS3_BOVIN
185-192
2
A:185-192
B:185-192
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3dqsa_ (A:)
1b: SCOP_d3dqsb_ (B:)
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Protein Domains
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(
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Organisms
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Superfamily
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Family
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Protein domain
:
automated matches
(15)
Cow (Bos taurus) [TaxId: 9913]
(3)
1a
d3dqsa_
A:
1b
d3dqsb_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Asymmetric Unit 1
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