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3DHI
Biol. Unit 1
Info
Asym.Unit (192 KB)
Biol.Unit 1 (367 KB)
Biol.Unit 2 (367 KB)
Biol.Unit 3 (367 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF REDUCED TOLUENE 4-MONOXYGENASE HYDROXYLASE COMPLEXED WITH EFFECTOR PROTEIN
Authors
:
L. J. Bailey, J. G. Mccoy, G. N. Phillips Jr. , B. G. Fox
Date
:
17 Jun 08 (Deposition) - 30 Dec 08 (Release) - 30 Jan 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.68
Chains
:
Asym. Unit : A,B,C,E
Biol. Unit 1: A,B,C,E (2x)
Biol. Unit 2: A,B,C,E (2x)
Biol. Unit 3: A,B,C,E (2x)
Keywords
:
Multicomponent Monooxygenase, Aromatic Hydrocarbons Catabolism, Fad, Flavoprotein, Iron, Monooxygenase, Oxidoreductase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
L. J. Bailey, J. G. Mccoy, G. N. Phillips Jr. , B. G. Fox
Structural Consequences Of Effector Protein Complex Formation In A Diiron Hydroxylase.
Proc. Natl. Acad. Sci. Usa V. 105 19194 2008
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Hetero Components
(3, 8)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
1b: PENTAETHYLENE GLYCOL (1PEb)
2a: ACETATE ION (ACTa)
3a: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-... (BTBa)
4a: FE (III) ION (FEa)
4b: FE (III) ION (FEb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
1PE
4
Ligand/Ion
PENTAETHYLENE GLYCOL
2
ACT
2
Ligand/Ion
ACETATE ION
3
BTB
2
Ligand/Ion
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
4
FE
-1
Ligand/Ion
FE (III) ION
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLU A:104 , GLU A:134 , HIS A:137 , GLU A:231 , HOH A:501 , FE A:601 , ACT A:602
BINDING SITE FOR RESIDUE FE A 600
2
AC2
SOFTWARE
GLU A:134 , GLU A:197 , GLU A:231 , HIS A:234 , FE A:600 , ACT A:602
BINDING SITE FOR RESIDUE FE A 601
3
AC3
SOFTWARE
GLU A:104 , GLU A:134 , LEU A:192 , PHE A:196 , GLU A:197 , GLU A:231 , HOH A:501 , FE A:600 , FE A:601
BINDING SITE FOR RESIDUE ACT A 602
4
AC4
SOFTWARE
TRP A:167 , GLY A:334 , TRP A:338 , THR A:341 , THR A:392 , LEU A:393 , PRO A:394 , PRO A:403 , LEU A:464
BINDING SITE FOR RESIDUE 1PE A 603
5
AC5
SOFTWARE
GLN B:100 , ARG B:104 , GLN B:236 , GLN B:237 , TRP B:240 , PRO B:248 , ASP B:252 , HOH B:792
BINDING SITE FOR RESIDUE 1PE B 604
6
AC6
SOFTWARE
HOH A:732 , VAL C:20 , LYS C:33 , TYR C:36 , HIS C:37 , HOH C:328 , ASP E:93 , HOH E:591 , HOH E:676
BINDING SITE FOR RESIDUE BTB C 605
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(3, 3)
Info
All SCOP Domains
1a: SCOP_d3dhia_ (A:)
2a: SCOP_d3dhic_ (C:)
3a: SCOP_d3dhie_ (E:)
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(
)
Protein Domains
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(
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Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Ferritin-like
(533)
Superfamily
:
Ferritin-like
(489)
Family
:
Ribonucleotide reductase-like
(185)
Protein domain
:
automated matches
(42)
Pseudomonas mendocina [TaxId: 300]
(14)
1a
d3dhia_
A:
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
beta-Grasp (ubiquitin-like)
(1032)
Superfamily
:
TmoB-like
(31)
Family
:
automated matches
(14)
Protein domain
:
automated matches
(14)
Pseudomonas mendocina [TaxId: 300]
(14)
2a
d3dhic_
C:
Fold
:
Monooxygenase (hydroxylase) regulatory protein
(23)
Superfamily
:
Monooxygenase (hydroxylase) regulatory protein
(23)
Family
:
Monooxygenase (hydroxylase) regulatory protein
(23)
Protein domain
:
Toluene-4-monooxygenase catalytic effector protein
(15)
Pseudomonas mendocina [TaxId: 300]
(15)
3a
d3dhie_
E:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_3dhiC00 (C:2-83)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
Ubiquitin-like (UB roll)
(674)
Homologous Superfamily
:
TmoB-like (Pfam 06234). Chain C
(13)
Pseudomonas mendocina. Organism_taxid: 300.
(5)
1a
3dhiC00
C:2-83
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Pfam Domains
(0, 0)
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Show PDB file:
Asym.Unit (192 KB)
Header - Asym.Unit
Biol.Unit 1 (367 KB)
Header - Biol.Unit 1
Biol.Unit 2 (367 KB)
Header - Biol.Unit 2
Biol.Unit 3 (367 KB)
Header - Biol.Unit 3
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