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3D9I
Biol. Unit 1
Info
Asym.Unit (59 KB)
Biol.Unit 1 (28 KB)
Biol.Unit 2 (28 KB)
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(1)
Title
:
SNAPSHOTS OF THE RNA PROCESSING FACTOR SCAF8 BOUND TO DIFFERENT PHOSPHORYLATED FORMS OF THE CARBOXY-TERMINAL DOMAIN OF RNA-POLYMERASE II
Authors
:
R. Becker, B. Loll, A. Meinhart
Date
:
27 May 08 (Deposition) - 10 Jun 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.91
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Scaf8, Rna Polymerase Ii Ctd Interacting Domain, Arm Repeats, Phospho-Ctd, Phosphoprotein, Rna-Binding, Transcription
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Becker, B. Loll, A. Meinhart
Snapshots Of The Rna Processing Factor Scaf8 Bound To Different Phosphorylated Forms Of The Carboxyl-Terminal Domain Of Rna Polymerase Ii.
J. Biol. Chem. V. 283 22659 2008
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Hetero Components
(3, 11)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
2a: AMMONIUM ION (NH4a)
2b: AMMONIUM ION (NH4b)
2c: AMMONIUM ION (NH4c)
2d: AMMONIUM ION (NH4d)
2e: AMMONIUM ION (NH4e)
2f: AMMONIUM ION (NH4f)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
3g: SULFATE ION (SO4g)
3h: SULFATE ION (SO4h)
3i: SULFATE ION (SO4i)
3j: SULFATE ION (SO4j)
3k: SULFATE ION (SO4k)
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No.
Name
Count
Type
Full Name
1
GOL
3
Ligand/Ion
GLYCEROL
2
NH4
2
Ligand/Ion
AMMONIUM ION
3
SO4
6
Ligand/Ion
SULFATE ION
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: BC3 (SOFTWARE)
08: BC4 (SOFTWARE)
09: BC9 (SOFTWARE)
10: CC2 (SOFTWARE)
11: CC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LYS A:35 , ASN A:91 , SER A:94
BINDING SITE FOR RESIDUE SO4 A 146
02
AC2
SOFTWARE
TYR A:40 , LYS A:41 , ARG A:87 , ASN A:90
BINDING SITE FOR RESIDUE SO4 A 147
03
AC3
SOFTWARE
LYS A:41 , ARG A:87
BINDING SITE FOR RESIDUE SO4 A 148
04
AC4
SOFTWARE
ARG A:71 , LEU A:116 , ASN A:120 , ALA B:136 , HIS B:140
BINDING SITE FOR RESIDUE SO4 A 149
05
AC5
SOFTWARE
PRO A:20 , TYR A:64 , LYS A:109
BINDING SITE FOR RESIDUE SO4 A 150
06
AC6
SOFTWARE
GLU A:10 , LYS A:25 , TYR B:12
BINDING SITE FOR RESIDUE SO4 A 151
07
BC3
SOFTWARE
PHE A:77 , LYS A:81 , ASP A:133
BINDING SITE FOR RESIDUE NH4 A 303
08
BC4
SOFTWARE
ILE A:37 , SER A:73 , PHE A:77 , ASP A:82
BINDING SITE FOR RESIDUE NH4 A 304
09
BC9
SOFTWARE
GLN A:72 , HIS A:75 , GLN A:97 , ARG A:101
BINDING SITE FOR RESIDUE GOL A 1000
10
CC2
SOFTWARE
LYS A:35 , ALA A:36 , ILE A:37 , LYS A:38 , SER A:89 , ASN A:90 , ILE A:127
BINDING SITE FOR RESIDUE GOL A 1002
11
CC3
SOFTWARE
SER A:13 , ASP A:16 , LYS A:25 , ASN B:8
BINDING SITE FOR RESIDUE GOL A 1003
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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Asymmetric Unit 1
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Asym.Unit (59 KB)
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